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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-u.5   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-r.7   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-e.2   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.bio   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.hor   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.lig   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.str   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 ath-m.4.tis   MCM2   minichromosome maintenance (MCM2/3/5) family protein 
 bra-r.6   103849416   DNA replication licensing factor MCM2 
 bna-r.1   106371887   DNA replication licensing factor MCM2-like 
 bna-r.1   106375624   DNA replication licensing factor MCM2-like 
 bna-r.1   106380468   DNA replication licensing factor MCM2 
 ghi-r.1   107910656   DNA replication licensing factor MCM2 
 ghi-r.1   107888519   DNA replication licensing factor MCM2 
 ghi-r.1   107888453   DNA replication licensing factor MCM2 
 cit-r.1   102630547   DNA replication licensing factor MCM2 
 gma-u.5   100799441   DNA replication licensing factor MCM2 
 gma-u.5   100813006   DNA replication licensing factor MCM2 
 vvi-u.5   100266163   DNA replication licensing factor MCM2 
 ppo-u.5   18094485   DNA replication licensing factor MCM2 
 mtr-u.5   11413210   DNA replication licensing factor MCM2 
 sly-u.5   101260396   DNA replication licensing factor MCM2 
 sot-r.1   102589508   DNA replication licensing factor MCM2 
 nta-r.1   107808167   DNA replication licensing factor MCM2 
 nta-r.1   107805831   DNA replication licensing factor MCM2 
 osa-u.5   4350526   DNA replication licensing factor MCM2-like 
 zma-u.5   100501077   uncharacterized LOC100501077 
 tae-r.2   100037644   DNA replication licensing factor MCM2 
 tae-r.2   123182078   DNA replication licensing factor MCM2 
 tae-r.2   543455   DNA replication licensing factor MCM2 
 hvu-r.1   123442642   DNA replication licensing factor MCM2 
 sbi-r.1   8155437   DNA replication licensing factor MCM2 
 bdi-r.1   100824624   DNA replication licensing factor MCM2 
 cre-r.1   CHLRE_07g338000v5   uncharacterized protein 

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Top 50 coexpressed genes to MCM2 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to MCM2 (ath-m.9 coexpression data)

CoexMap"841056"


athMCM2 | Entrez gene ID : 841056      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 3 3 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03030 [list] [network] DNA replication (43 genes)
GO BP
GO:0010082 [list] [network] regulation of root meristem growth  (44 genes)  IMP  
GO:0042127 [list] [network] regulation of cell population proliferation  (93 genes)  IMP  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO:0048364 [list] [network] root development  (600 genes)  IMP  
GO CC
GO:0000347 [list] [network] THO complex  (14 genes)  IDA  
GO:0000785 [list] [network] chromatin  (140 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001185154.1 [sequence] [blastp]
NP_175112.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_001185154.1)
nucl 6,  cyto 3,  nucl_plas 3  (predict for NP_175112.2)
Subcellular
localization
TargetP
chlo 8,  other 4  (predict for NP_001185154.1)
chlo 8,  other 4  (predict for NP_175112.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
MCM2
ath-u.5
for
MCM2
ath-r.7
for
MCM2
ath-e.2
for
MCM2
ath-m.4.bio
for
MCM2
ath-m.4.hor
for
MCM2
ath-m.4.lig
for
MCM2
ath-m.4.str
for
MCM2
ath-m.4.tis
for
MCM2
bra-r.6
for
103849416
bna-r.1
for
106371887
bna-r.1
for
106375624
bna-r.1
for
106380468
ghi-r.1
for
107910656
ghi-r.1
for
107888519
ghi-r.1
for
107888453
cit-r.1
for
102630547
gma-u.5
for
100799441
gma-u.5
for
100813006
vvi-u.5
for
100266163
ppo-u.5
for
18094485
mtr-u.5
for
11413210
sly-u.5
for
101260396
sot-r.1
for
102589508
nta-r.1
for
107808167
nta-r.1
for
107805831
osa-u.5
for
4350526
zma-u.5
for
100501077
tae-r.2
for
100037644
tae-r.2
for
123182078
tae-r.2
for
543455
hvu-r.1
for
123442642
sbi-r.1
for
8155437
bdi-r.1
for
100824624
cre-r.1
for
CHLRE_07g338000v5


Ortholog ID: 8733
Species ath bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol MCM2 LOC103849416 LOC106371887 LOC106375624 LOC106380468 LOC107910656 LOC107888519 LOC107888453 LOC102630547 LOC100799441 LOC100813006 LOC100266163 LOC18094485 LOC11413210 LOC101260396 LOC102589508 LOC107808167 LOC107805831 LOC4350526 LOC100501077 LOC100037644 LOC123182078 LOC543455 LOC123442642 LOC8155437 LOC100824624 CHLRE_07g338000v5
Function* minichromosome maintenance (MCM2/3/5) family protein DNA replication licensing factor MCM2 DNA replication licensing factor MCM2-like DNA replication licensing factor MCM2-like DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2-like uncharacterized LOC100501077 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 DNA replication licensing factor MCM2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 12
ath03410 Base excision repair 2
ath03420 Nucleotide excision repair 2
ath03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 12
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 3
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 8
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 10
bna03430 Mismatch repair 6
bna03410 Base excision repair 5
bna03420 Nucleotide excision repair 5
bna03440 Homologous recombination 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 11
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 15
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
cit00230 Purine metabolism 2
cit00240 Pyrimidine metabolism 2
cit00480 Glutathione metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 9
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 11
osa03420 Nucleotide excision repair 4
osa03430 Mismatch repair 3
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae00270 Cysteine and methionine metabolism 3
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 7
bdi03440 Homologous recombination 3
bdi03460 Fanconi anemia pathway 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841056 103849416 106371887 106375624 106380468 107910656 107888519 107888453 102630547 100799441 100813006 100266163 18094485 11413210 101260396 102589508 107808167 107805831 4350526 100501077 100037644 123182078 543455 123442642 8155437 100824624 5725643
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