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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-u.5   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-r.7   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-e.2   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-m.4.bio   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-m.4.hor   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-m.4.lig   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-m.4.str   AT1G48550   Vacuolar protein sorting-associated protein 26 
 ath-m.4.tis   AT1G48550   Vacuolar protein sorting-associated protein 26 
 bra-r.6   103871466   vacuolar protein sorting-associated protein 26C 
 bna-r.1   106358656   vacuolar protein sorting-associated protein 26C 
 bna-r.1   111207130   vacuolar protein sorting-associated protein 26C 
 ghi-r.1   107926723   vacuolar protein sorting-associated protein 26C 
 ghi-r.1   107953330   vacuolar protein sorting-associated protein 26C 
 cit-r.1   102626362   uncharacterized LOC102626362 
 gma-u.5   121174393   vacuolar protein sorting-associated protein 26C 
 gma-u.5   100820593   vacuolar protein sorting-associated protein 26C 
 vvi-u.5   100259471   uncharacterized LOC100259471 
 ppo-u.5   7474825   uncharacterized LOC7474825 
 mtr-u.5   11422226   vacuolar protein sorting-associated protein 26C 
 sly-u.5   101247599   uncharacterized LOC101247599 
 sot-r.1   102594283   Down syndrome critical region protein 3 
 nta-r.1   107802566   uncharacterized LOC107802566 
 nta-r.1   107788801   uncharacterized LOC107788801 

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Top 50 coexpressed genes to AT1G48550 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G48550 (ath-m.9 coexpression data)

CoexMap"841276"


athAT1G48550 | Entrez gene ID : 841276      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta tae zma bdi osa sbi hvu cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042147 [list] [network] retrograde transport, endosome to Golgi  (7 genes)  IGI  
GO:0048768 [list] [network] root hair cell tip growth  (32 genes)  IGI  
GO CC
GO:0030904 [list] [network] retromer complex  (8 genes)  IPI  
GO:0010008 [list] [network] endosome membrane  (53 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  ISS  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO:0005622 [list] [network] intracellular anatomical structure  (21227 genes)  ISS  
GO MF
Protein NP_001185172.1 [sequence] [blastp]
NP_175288.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo_mito 5,  chlo 4,  mito 4  (predict for NP_001185172.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for NP_175288.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for NP_001185172.1)
chlo 4,  mito 3  (predict for NP_175288.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G48550
ath-u.5
for
AT1G48550
ath-r.7
for
AT1G48550
ath-e.2
for
AT1G48550
ath-m.4.bio
for
AT1G48550
ath-m.4.hor
for
AT1G48550
ath-m.4.lig
for
AT1G48550
ath-m.4.str
for
AT1G48550
ath-m.4.tis
for
AT1G48550
bra-r.6
for
103871466
bna-r.1
for
106358656
bna-r.1
for
111207130
ghi-r.1
for
107926723
ghi-r.1
for
107953330
cit-r.1
for
102626362
gma-u.5
for
121174393
gma-u.5
for
100820593
vvi-u.5
for
100259471
ppo-u.5
for
7474825
mtr-u.5
for
11422226
sly-u.5
for
101247599
sot-r.1
for
102594283
nta-r.1
for
107802566
nta-r.1
for
107788801


Ortholog ID: 13224
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta
Symbol AT1G48550 LOC103871466 LOC106358656 LOC111207130 LOC107926723 LOC107953330 LOC102626362 LOC121174393 LOC100820593 LOC100259471 LOC7474825 LOC11422226 LOC101247599 LOC102594283 LOC107802566 LOC107788801
Function* Vacuolar protein sorting-associated protein 26 vacuolar protein sorting-associated protein 26C vacuolar protein sorting-associated protein 26C vacuolar protein sorting-associated protein 26C vacuolar protein sorting-associated protein 26C vacuolar protein sorting-associated protein 26C uncharacterized LOC102626362 vacuolar protein sorting-associated protein 26C vacuolar protein sorting-associated protein 26C uncharacterized LOC100259471 uncharacterized LOC7474825 vacuolar protein sorting-associated protein 26C uncharacterized LOC101247599 Down syndrome critical region protein 3 uncharacterized LOC107802566 uncharacterized LOC107788801
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 2
bna04146 Peroxisome 2
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04517 IgSF CAM signaling 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 4
cit03040 Spliceosome 3
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 2
mtr00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00061 Fatty acid biosynthesis 2
nta00062 Fatty acid elongation 2
nta01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841276 103871466 106358656 111207130 107926723 107953330 102626362 121174393 100820593 100259471 7474825 11422226 101247599 102594283 107802566 107788801
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