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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G48610   AT hook motif-containing protein 
 ath-u.5   AT1G48610   AT hook motif-containing protein 
 ath-r.7   AT1G48610   AT hook motif-containing protein 
 ath-e.2   AT1G48610   AT hook motif-containing protein 
 ath-m.4.bio   AT1G48610   AT hook motif-containing protein 
 ath-m.4.hor   AT1G48610   AT hook motif-containing protein 
 ath-m.4.lig   AT1G48610   AT hook motif-containing protein 
 ath-m.4.str   AT1G48610   AT hook motif-containing protein 
 ath-m.4.tis   AT1G48610   AT hook motif-containing protein 
 bra-r.6   103832990   putative DNA-binding protein At1g48610 
 bra-r.6   103868674   putative DNA-binding protein At1g48610 
 bra-r.6   103871456   putative DNA-binding protein At1g48610 
 bna-r.1   106360532   putative DNA-binding protein At1g48610 
 bna-r.1   106376400   putative DNA-binding protein At1g48610 
 bna-r.1   106423709   putative DNA-binding protein At1g48610 

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Top 50 coexpressed genes to AT1G48610 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G48610 (ath-m.9 coexpression data)

CoexMap"841282"


athAT1G48610 | Entrez gene ID : 841282      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 9 3 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
Protein NP_564531.1 [sequence] [blastp]
NP_973995.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  mito 1,  plas 1,  extr 1,  chlo_mito 1,  mito_plas 1  (predict for NP_564531.1)
nucl 9,  chlo 1,  cyto 1  (predict for NP_973995.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for NP_564531.1)
other 5,  chlo 4  (predict for NP_973995.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G48610
ath-u.5
for
AT1G48610
ath-r.7
for
AT1G48610
ath-e.2
for
AT1G48610
ath-m.4.bio
for
AT1G48610
ath-m.4.hor
for
AT1G48610
ath-m.4.lig
for
AT1G48610
ath-m.4.str
for
AT1G48610
ath-m.4.tis
for
AT1G48610
bra-r.6
for
103832990
bra-r.6
for
103868674
bra-r.6
for
103871456
bna-r.1
for
106360532
bna-r.1
for
106376400
bna-r.1
for
106423709


Ortholog ID: 15240
Species ath bra bra bra bna bna bna
Symbol AT1G48610 LOC103832990 LOC103868674 LOC103871456 LOC106423709 LOC111215634 LOC111216224
Function* AT hook motif-containing protein putative DNA-binding protein At1g48610 putative DNA-binding protein At1g48610 putative DNA-binding protein At1g48610 putative DNA-binding protein At1g48610 putative DNA-binding protein At1g48610 putative DNA-binding protein At1g48610
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03082 ATP-dependent chromatin remodeling 2
bra00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841282 103832990 103868674 103871456 106423709 111215634 111216224
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