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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-u.5   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-r.7   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-e.2   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-m.4.bio   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-m.4.hor   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-m.4.lig   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-m.4.str   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-m.4.tis   TTL1   tetratricopetide-repeat thioredoxin-like 1 
 ath-u.5   TTL3   tetratricopetide-repeat thioredoxin-like 3 
 ath-u.5   TTL4   tetratricopetide-repeat thioredoxin-like 4 
 bra-r.6   103858022   inactive TPR repeat-containing thioredoxin TTL3 
 bra-r.6   103841735   TPR repeat-containing thioredoxin TTL4 
 bra-r.6   103868440   TPR repeat-containing thioredoxin TTL1 
 bna-r.1   125604576   TPR repeat-containing thioredoxin TTL1-like 
 bna-r.1   106451598   TPR repeat-containing thioredoxin TTL1-like 
 bna-r.1   106450615   inactive TPR repeat-containing thioredoxin TTL3-like 
 ghi-r.1   107917788   TPR repeat-containing thioredoxin TTL1 
 ghi-r.1   107888461   inactive TPR repeat-containing thioredoxin TTL3 
 ghi-r.1   107888526   inactive TPR repeat-containing thioredoxin TTL3 
 cit-r.1   102625520   TPR repeat-containing thioredoxin TTL1 
 cit-r.1   102610443   inactive TPR repeat-containing thioredoxin TTL3 
 gma-u.5   100805790   TPR repeat-containing thioredoxin TTL1 
 gma-u.5   100804531   TPR repeat-containing thioredoxin TTL1 
 gma-u.5   100799577   TPR repeat-containing thioredoxin TTL1 
 vvi-u.5   100247135   inactive TPR repeat-containing thioredoxin TTL3 
 vvi-u.5   100255533   TPR repeat-containing thioredoxin TTL1 
 ppo-u.5   18095504   inactive TPR repeat-containing thioredoxin TTL3 
 ppo-u.5   7455956   TPR repeat-containing thioredoxin TTL1 
 mtr-u.5   25487248   TPR repeat-containing thioredoxin TTL1 
 sly-u.5   101266241   TPR repeat-containing thioredoxin TTL1 
 sot-r.1   102604617   TPR repeat-containing thioredoxin TTL1 
 nta-r.1   107762240   TPR repeat-containing thioredoxin TTL1 
 nta-r.1   107769108   TPR repeat-containing thioredoxin TTL1 
 nta-r.1   107817678   TPR repeat-containing thioredoxin TTL1-like 
 osa-u.5   4324584   inactive TPR repeat-containing thioredoxin TTL3 
 osa-u.5   4338096   TPR repeat-containing thioredoxin TTL1 
 zma-u.5   103653343   TPR repeat-containing thioredoxin TTL1 
 zma-u.5   100191407   TPR repeat-containing thioredoxin TTL1 
 tae-r.2   123069203   inactive TPR repeat-containing thioredoxin TTL3 
 tae-r.2   123060687   inactive TPR repeat-containing thioredoxin TTL3 
 tae-r.2   123077725   inactive TPR repeat-containing thioredoxin TTL3 
 hvu-r.1   123443130   inactive TPR repeat-containing thioredoxin TTL3-like 
 sbi-r.1   8079505   inactive TPR repeat-containing thioredoxin TTL3 

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Top 50 coexpressed genes to TTL1 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TTL1 (ath-m.9 coexpression data)

CoexMap"841764"


athTTL1 | Entrez gene ID : 841764      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 2 2 1 1 1 3 2 2 3 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009789 [list] [network] positive regulation of abscisic acid-activated signaling pathway  (53 genes)  IMP  
GO:0009651 [list] [network] response to salt stress  (473 genes)  IMP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO:0006970 [list] [network] response to osmotic stress  (578 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_175737.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  mito 1,  vacu 1,  pero 1  (predict for NP_175737.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for NP_175737.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
TTL1
ath-u.5
for
TTL1
ath-r.7
for
TTL1
ath-e.2
for
TTL1
ath-m.4.bio
for
TTL1
ath-m.4.hor
for
TTL1
ath-m.4.lig
for
TTL1
ath-m.4.str
for
TTL1
ath-m.4.tis
for
TTL1
ath-u.5
for
TTL3
ath-u.5
for
TTL4
bra-r.6
for
103858022
bra-r.6
for
103841735
bra-r.6
for
103868440
bna-r.1
for
125604576
bna-r.1
for
106451598
bna-r.1
for
106450615
ghi-r.1
for
107917788
ghi-r.1
for
107888461
ghi-r.1
for
107888526
cit-r.1
for
102625520
cit-r.1
for
102610443
gma-u.5
for
100805790
gma-u.5
for
100804531
gma-u.5
for
100799577
vvi-u.5
for
100247135
vvi-u.5
for
100255533
ppo-u.5
for
18095504
ppo-u.5
for
7455956
mtr-u.5
for
25487248
sly-u.5
for
101266241
sot-r.1
for
102604617
nta-r.1
for
107762240
nta-r.1
for
107769108
nta-r.1
for
107817678
osa-u.5
for
4324584
osa-u.5
for
4338096
zma-u.5
for
103653343
zma-u.5
for
100191407
tae-r.2
for
123069203
tae-r.2
for
123060687
tae-r.2
for
123077725
hvu-r.1
for
123443130
sbi-r.1
for
8079505


Ortholog ID: 3000
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi
Symbol TTL1 TTL3 TTL4 LOC103868440 LOC103866649 LOC103832678 LOC106377291 LOC106368282 LOC106388282 LOC107909180 LOC107915830 LOC107928386 LOC102625520 LOC102610443 LOC100805790 LOC100799577 LOC100792373 LOC100247135 LOC100255533 LOC18095504 LOC7455956 LOC25487248 LOC101266241 LOC102604617 LOC107762240 LOC107769108 LOC107817124 LOC4324584 LOC4338096 LOC103653343 LOC100191407 LOC123069203 LOC123060687 LOC123077725 LOC123443130 LOC8079505
Function* tetratricopetide-repeat thioredoxin-like 1 tetratricopetide-repeat thioredoxin-like 3 tetratricopetide-repeat thioredoxin-like 4 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1-like TPR repeat-containing thioredoxin TTL4-like inactive TPR repeat-containing thioredoxin TTL3-like TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 TPR repeat-containing thioredoxin TTL1 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3 inactive TPR repeat-containing thioredoxin TTL3-like inactive TPR repeat-containing thioredoxin TTL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 2
bra00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01250 Biosynthesis of nucleotide sugars 4
bra00541 Biosynthesis of various nucleotide sugars 3
bra00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00051 Fructose and mannose metabolism 2
cit00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 4
osa01232 Nucleotide metabolism 4
osa00230 Purine metabolism 3
osa00480 Glutathione metabolism 3
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00270 Cysteine and methionine metabolism 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04146 Peroxisome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841764 818858 825031 103868440 103866649 103832678 106377291 106368282 106388282 107909180 107915830 107928386 102625520 102610443 100805790 100799577 100792373 100247135 100255533 18095504 7455956 25487248 101266241 102604617 107762240 107769108 107817124 4324584 4338096 103653343 100191407 123069203 123060687 123077725 123443130 8079505
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