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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G53380   hypothetical protein (DUF641) 
 ath-u.5   AT1G53380   hypothetical protein (DUF641) 
 ath-r.7   AT1G53380   hypothetical protein (DUF641) 
 ath-e.2   AT1G53380   hypothetical protein (DUF641) 
 ath-m.4.bio   AT1G53380   hypothetical protein (DUF641) 
 ath-m.4.hor   AT1G53380   hypothetical protein (DUF641) 
 ath-m.4.lig   AT1G53380   hypothetical protein (DUF641) 
 ath-m.4.str   AT1G53380   hypothetical protein (DUF641) 
 ath-m.4.tis   AT1G53380   hypothetical protein (DUF641) 
 ath-u.5   AT3G14870   hypothetical protein (DUF641) 
 bra-r.6   103859596   protein GRAVITROPIC IN THE LIGHT 1 
 bra-r.6   103832669   protein GRAVITROPIC IN THE LIGHT 1 
 bra-r.6   103869980   protein GRAVITROPIC IN THE LIGHT 1 
 bna-r.1   106451469   protein GRAVITROPIC IN THE LIGHT 1 
 bna-r.1   125577241   protein GRAVITROPIC IN THE LIGHT 1-like 
 bna-r.1   125595461   protein GRAVITROPIC IN THE LIGHT 1-like 
 ghi-r.1   107924735   protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1   107934651   protein GRAVITROPIC IN THE LIGHT 1 
 ghi-r.1   107895315   protein GRAVITROPIC IN THE LIGHT 1 
 cit-r.1   102609393   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100818091   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100810236   protein GRAVITROPIC IN THE LIGHT 1 
 gma-u.5   100799419   protein GRAVITROPIC IN THE LIGHT 1 
 vvi-u.5   100255640   protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5   7455935   protein GRAVITROPIC IN THE LIGHT 1 
 ppo-u.5   18095453   protein GRAVITROPIC IN THE LIGHT 1 
 mtr-u.5   11413374   protein GRAVITROPIC IN THE LIGHT 1 
 mtr-u.5   25501259   protein GRAVITROPIC IN THE LIGHT 1 
 sly-u.5   101246157   protein GRAVITROPIC IN THE LIGHT 1 
 sot-r.1   102583964   IRK-interacting protein-like 
 nta-r.1   107800875   protein GRAVITROPIC IN THE LIGHT 1-like 
 nta-r.1   107784848   protein GRAVITROPIC IN THE LIGHT 1 

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Top 50 coexpressed genes to AT1G53380 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G53380 (ath-m.9 coexpression data)

CoexMap"841774"


athAT1G53380 | Entrez gene ID : 841774      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 10 3 3 3 1 3 1 2 2 1 1 2 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009959 [list] [network] negative gravitropism  (25 genes)  IEA  
GO:0009639 [list] [network] response to red or far red light  (221 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001031180.1 [sequence] [blastp]
NP_001077711.1 [sequence] [blastp]
NP_001320355.1 [sequence] [blastp]
NP_001320356.1 [sequence] [blastp]
NP_175744.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001031180.1)
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001077711.1)
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001320355.1)
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_001320356.1)
nucl 4,  chlo 3,  cysk 1,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for NP_175744.1)
Subcellular
localization
TargetP
other 7  (predict for NP_001031180.1)
other 7  (predict for NP_001077711.1)
other 7  (predict for NP_001320355.1)
other 7  (predict for NP_001320356.1)
other 7  (predict for NP_175744.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G53380
ath-u.5
for
AT1G53380
ath-r.7
for
AT1G53380
ath-e.2
for
AT1G53380
ath-m.4.bio
for
AT1G53380
ath-m.4.hor
for
AT1G53380
ath-m.4.lig
for
AT1G53380
ath-m.4.str
for
AT1G53380
ath-m.4.tis
for
AT1G53380
ath-u.5
for
AT3G14870
bra-r.6
for
103859596
bra-r.6
for
103832669
bra-r.6
for
103869980
bna-r.1
for
106451469
bna-r.1
for
125577241
bna-r.1
for
125595461
ghi-r.1
for
107924735
ghi-r.1
for
107934651
ghi-r.1
for
107895315
cit-r.1
for
102609393
gma-u.5
for
100818091
gma-u.5
for
100810236
gma-u.5
for
100799419
vvi-u.5
for
100255640
ppo-u.5
for
7455935
ppo-u.5
for
18095453
mtr-u.5
for
11413374
mtr-u.5
for
25501259
sly-u.5
for
101246157
sot-r.1
for
102583964
nta-r.1
for
107800875
nta-r.1
for
107784848


Ortholog ID: 5509
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sot nta nta
Symbol AT1G53380 AT3G14870 LOC103859596 LOC103832669 LOC103869980 LOC106451469 LOC125577241 LOC106399251 LOC107934651 LOC107895315 LOC107920517 LOC102609393 LOC100818091 LOC100799419 LOC100795678 LOC100255640 LOC7455935 LOC18095453 LOC11413374 LOC25501259 LOC101246157 LOC102583964 LOC107800875 LOC107784848
Function* hypothetical protein (DUF641) hypothetical protein (DUF641) protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 protein GRAVITROPIC IN THE LIGHT 1 IRK-interacting protein-like protein GRAVITROPIC IN THE LIGHT 1-like protein GRAVITROPIC IN THE LIGHT 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00290 Valine, leucine and isoleucine biosynthesis 2
bra01200 Carbon metabolism 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04145 Phagosome 3
bra04517 IgSF CAM signaling 3
bra04814 Motor proteins 3
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 4
vvi00520 Amino sugar and nucleotide sugar metabolism 3
vvi00541 Biosynthesis of various nucleotide sugars 3
vvi00040 Pentose and glucuronate interconversions 2
vvi00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00740 Riboflavin metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03440 Homologous recombination 2
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta00230 Purine metabolism 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 3
nta00230 Purine metabolism 2
nta04016 MAPK signaling pathway - plant 2
nta04626 Plant-pathogen interaction 2
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841774 820716 103859596 103832669 103869980 106451469 125577241 106399251 107934651 107895315 107920517 102609393 100818091 100799419 100795678 100255640 7455935 18095453 11413374 25501259 101246157 102583964 107800875 107784848
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