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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-r.7   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-e.2   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.bio   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.hor   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.lig   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.str   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 ath-m.4.tis   AT1G55270   Galactose oxidase/kelch repeat superfamily protein 
 bra-r.6   103871048   F-box/kelch-repeat protein At1g55270 
 bra-r.6   103829795   F-box/kelch-repeat protein At1g55270 
 bna-r.1   106407362   F-box/kelch-repeat protein At1g55270 
 bna-r.1   125575582   F-box/kelch-repeat protein At1g55270-like 
 bna-r.1   125601967   F-box/kelch-repeat protein At1g55270-like 
 ghi-r.1   121212643   F-box/kelch-repeat protein At1g55270 
 ghi-r.1   121203517   F-box/kelch-repeat protein At1g55270 
 ghi-r.1   107962629   F-box/kelch-repeat protein At1g55270 
 cit-r.1   102623158   F-box/kelch-repeat protein At1g55270 
 cit-r.1   102627238   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100782411   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100796811   F-box/kelch-repeat protein At1g55270 
 gma-u.5   100788124   F-box/kelch-repeat protein At1g55270 
 vvi-u.5   100255323   F-box/kelch-repeat protein At1g55270-like 
 vvi-u.5   100243988   F-box/kelch-repeat protein At1g55270 
 ppo-u.5   7483258   F-box/kelch-repeat protein At1g55270 
 ppo-u.5   7461372   F-box/kelch-repeat protein At1g55270 
 mtr-u.5   11446637   F-box/kelch-repeat protein At1g55270 
 mtr-u.5   11417985   F-box/kelch-repeat protein At1g55270 
 sly-u.5   101255619   F-box/kelch-repeat protein At1g55270 
 sly-u.5   101251313   F-box/kelch-repeat protein At1g55270 
 sot-r.1   102596716   F-box/kelch-repeat protein At1g55270-like 
 sot-r.1   102604982   F-box/kelch-repeat protein At1g55270 
 nta-r.1   107793154   F-box/kelch-repeat protein At1g55270 
 nta-r.1   107786788   F-box/kelch-repeat protein At1g55270 
 nta-r.1   107763469   F-box/kelch-repeat protein At1g55270-like 
 osa-u.5   4331748   F-box/kelch-repeat protein At1g55270 
 osa-u.5   4348597   F-box/kelch-repeat protein At1g55270 
 zma-u.5   100284020   ring canal kelch 
 zma-u.5   100193397   uncharacterized LOC100193397 
 zma-u.5   100281098   kelch motif family protein 
 tae-r.2   123063732   F-box/kelch-repeat protein At1g55270 
 tae-r.2   123180897   F-box/kelch-repeat protein At1g55270 
 hvu-r.1   123449546   F-box/kelch-repeat protein At1g55270-like 
 hvu-r.1   123445733   F-box/kelch-repeat protein At1g55270-like 
 hvu-r.1   123429112   F-box/kelch-repeat protein At1g55270-like 
 sbi-r.1   8059831   F-box/kelch-repeat protein At1g55270 
 sbi-r.1   8062265   F-box/kelch-repeat protein At1g55270 
 bdi-r.1   100844846   F-box/kelch-repeat protein At1g55270 

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Top 50 coexpressed genes to AT1G55270 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G55270 (ath-m.9 coexpression data)

CoexMap"841972"


athAT1G55270 | Entrez gene ID : 841972      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 3 2 3 2 2 2 2 2 3 2 3 2 3 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:2000762 [list] [network] regulation of phenylpropanoid metabolic process  (29 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001320632.1 [sequence] [blastp]
NP_564684.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  nucl 2,  chlo_mito 2  (predict for NP_001320632.1)
chlo 4,  nucl 3,  chlo_mito 3  (predict for NP_564684.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001320632.1)
mito 5  (predict for NP_564684.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G55270
ath-u.5
for
AT1G55270
ath-r.7
for
AT1G55270
ath-e.2
for
AT1G55270
ath-m.4.bio
for
AT1G55270
ath-m.4.hor
for
AT1G55270
ath-m.4.lig
for
AT1G55270
ath-m.4.str
for
AT1G55270
ath-m.4.tis
for
AT1G55270
bra-r.6
for
103871048
bra-r.6
for
103829795
bna-r.1
for
106407362
bna-r.1
for
125575582
bna-r.1
for
125601967
ghi-r.1
for
121212643
ghi-r.1
for
121203517
ghi-r.1
for
107962629
cit-r.1
for
102623158
cit-r.1
for
102627238
gma-u.5
for
100782411
gma-u.5
for
100796811
gma-u.5
for
100788124
vvi-u.5
for
100255323
vvi-u.5
for
100243988
ppo-u.5
for
7483258
ppo-u.5
for
7461372
mtr-u.5
for
11446637
mtr-u.5
for
11417985
sly-u.5
for
101255619
sly-u.5
for
101251313
sot-r.1
for
102596716
sot-r.1
for
102604982
nta-r.1
for
107793154
nta-r.1
for
107786788
nta-r.1
for
107763469
osa-u.5
for
4331748
osa-u.5
for
4348597
zma-u.5
for
100284020
zma-u.5
for
100193397
zma-u.5
for
100281098
tae-r.2
for
123063732
tae-r.2
for
123180897
hvu-r.1
for
123449546
hvu-r.1
for
123445733
hvu-r.1
for
123429112
sbi-r.1
for
8059831
sbi-r.1
for
8062265
bdi-r.1
for
100844846


Ortholog ID: 2594
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae hvu hvu hvu sbi sbi bdi
Symbol AT1G55270 LOC103871048 LOC103829795 LOC106406156 LOC125610059 LOC106433604 LOC107962629 LOC107945489 LOC107945481 LOC102623158 LOC102627238 LOC100782411 LOC100796811 LOC100780827 LOC100255323 LOC100243988 LOC7483258 LOC7461372 LOC11446637 LOC11417985 LOC101255619 LOC101251313 LOC102596716 LOC102604982 LOC107793154 LOC107786788 LOC107763469 LOC4331748 LOC4348597 LOC100284020 LOC100193397 LOC100281098 LOC123084800 LOC123449546 LOC123445733 LOC123429112 LOC8059831 LOC8062265 LOC100844846
Function* Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 ring canal kelch uncharacterized LOC100193397 kelch motif family protein F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270-like F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270 F-box/kelch-repeat protein At1g55270
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 3
cit00020 Citrate cycle (TCA cycle) 2
cit01210 2-Oxocarboxylic acid metabolism 2
cit00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 2
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00520 Amino sugar and nucleotide sugar metabolism 3
sot04712 Circadian rhythm - plant 3
sot00053 Ascorbate and aldarate metabolism 2
sot01240 Biosynthesis of cofactors 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00904 Diterpenoid biosynthesis 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00630 Glyoxylate and dicarboxylate metabolism 3
zma00220 Arginine biosynthesis 2
zma00250 Alanine, aspartate and glutamate metabolism 2
zma00910 Nitrogen metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 4
tae03040 Spliceosome 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00100 Steroid biosynthesis 2
sbi00561 Glycerolipid metabolism 2
sbi00564 Glycerophospholipid metabolism 2
sbi00565 Ether lipid metabolism 2
sbi00590 Arachidonic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 9
bdi03020 RNA polymerase 2
bdi03420 Nucleotide excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841972 103871048 103829795 106406156 125610059 106433604 107962629 107945489 107945481 102623158 102627238 100782411 100796811 100780827 100255323 100243988 7483258 7461372 11446637 11417985 101255619 101251313 102596716 102604982 107793154 107786788 107763469 4331748 4348597 100284020 100193397 100281098 123084800 123449546 123445733 123429112 8059831 8062265 100844846
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