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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-u.5  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-r.7  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-e.2  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-m.4.bio  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-m.4.hor  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-m.4.lig  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-m.4.str  EMB3108  DEA(D/H)-box RNA helicase family protein 
 ath-m.4.tis  EMB3108  DEA(D/H)-box RNA helicase family protein 
 bra-r.6  103829370  DEAD-box ATP-dependent RNA helicase 22 
 bna-r.1  106432088  DEAD-box ATP-dependent RNA helicase 22 
 bna-r.1  106450173  DEAD-box ATP-dependent RNA helicase 22 
 ghi-r.1  107909623  DEAD-box ATP-dependent RNA helicase 22 
 cit-r.1  102619905  DEAD-box ATP-dependent RNA helicase 22 
 gma-u.5  100789323  DEAD-box ATP-dependent RNA helicase 22 
 vvi-u.5  100253463  DEAD-box ATP-dependent RNA helicase 22 
 ppo-u.5  7473248  DEAD-box ATP-dependent RNA helicase 22 
 mtr-u.5  11406386  DEAD-box ATP-dependent RNA helicase 22 
 sly-u.5  101264928  DEAD-box ATP-dependent RNA helicase 22 
 sot-r.1  102603759  DEAD-box ATP-dependent RNA helicase 22 
 nta-r.1  107793192  DEAD-box ATP-dependent RNA helicase 22 
 osa-u.5  4346941  DEAD-box ATP-dependent RNA helicase 22-like 
 zma-u.5  103632701  DEAD-box ATP-dependent RNA helicase 22 
 tae-r.2  123111871  DEAD-box ATP-dependent RNA helicase 22 
 tae-r.2  123121436  DEAD-box ATP-dependent RNA helicase 22 
 hvu-r.1  123395820  DEAD-box ATP-dependent RNA helicase 22 
 sbi-r.1  8056211  DEAD-box ATP-dependent RNA helicase 22 
 bdi-r.1  100822485  DEAD-box ATP-dependent RNA helicase 22 
 cre-r.1  CHLRE_03g166650v5  uncharacterized protein 

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Top 50 coexpressed genes to EMB3108 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to EMB3108 (ath-m.9 coexpression data)

CoexMap"842293"


athEMB3108 | Entrez gene ID : 842293
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_001321198.1 [sequence] [blastp]
NP_176207.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001321198.1)
chlo 10  (predict for NP_176207.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001321198.1)
chlo 8  (predict for NP_176207.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.9
for
EMB3108


ath-u.5
for
EMB3108


ath-r.7
for
EMB3108


ath-e.2
for
EMB3108


ath-m.4.bio
for
EMB3108


ath-m.4.hor
for
EMB3108


ath-m.4.lig
for
EMB3108


ath-m.4.str
for
EMB3108


ath-m.4.tis
for
EMB3108


bra-r.6
for
103829370


bna-r.1
for
106432088


bna-r.1
for
106450173


ghi-r.1
for
107909623


cit-r.1
for
102619905


gma-u.5
for
100789323


vvi-u.5
for
100253463


ppo-u.5
for
7473248


mtr-u.5
for
11406386


sly-u.5
for
101264928


sot-r.1
for
102603759


nta-r.1
for
107793192


osa-u.5
for
4346941


zma-u.5
for
103632701


tae-r.2
for
123111871


tae-r.2
for
123121436


hvu-r.1
for
123395820


sbi-r.1
for
8056211


bdi-r.1
for
100822485


cre-r.1
for
CHLRE_03g166650v5



Ortholog ID: 12044
Species ath bra bna bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae tae hvu sbi bdi cre
Symbol EMB3108 LOC103829370 LOC106432088 LOC106450173 LOC107909623 LOC102619905 LOC100789323 LOC100253463 LOC7473248 LOC11406386 LOC101264928 LOC102603759 LOC107793192 LOC4346941 LOC103632701 LOC123111871 LOC123121436 LOC123395820 LOC8056211 LOC100822485 CHLRE_03g166650v5
Function* DEA(D/H)-box RNA helicase family protein DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22-like DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 DEAD-box ATP-dependent RNA helicase 22 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 3
osa00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 3
sbi00261 Monobactam biosynthesis 2
sbi00300 Lysine biosynthesis 2
sbi01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842293 103829370 106432088 106450173 107909623 102619905 100789323 100253463 7473248 11406386 101264928 102603759 107793192 4346941 103632701 123111871 123121436 123395820 8056211 100822485 5729015
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