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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-u.5   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-r.7   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-e.2   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-m.4.bio   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-m.4.hor   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-m.4.lig   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-m.4.str   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-m.4.tis   AT1G60070   Adaptor protein complex AP-1, gamma subunit 
 ath-u.5   GAMMA-ADAPTIN 1   gamma-adaptin 1 
 bra-r.6   103840720   AP-1 complex subunit gamma-1 
 bra-r.6   103829252   AP-1 complex subunit gamma-1 
 bna-r.1   106358107   AP-1 complex subunit gamma-1-like 
 bna-r.1   106367581   AP-1 complex subunit gamma-1 
 bna-r.1   106401170   AP-1 complex subunit gamma-1-like 
 ghi-r.1   107948540   AP-1 complex subunit gamma-2 
 ghi-r.1   107942723   AP-1 complex subunit gamma-2 
 ghi-r.1   107909653   AP-1 complex subunit gamma-2 
 cit-r.1   102628648   AP-1 complex subunit gamma-2-like 
 gma-u.5   100815152   AP-1 complex subunit gamma-2 
 gma-u.5   100817075   AP-1 complex subunit gamma-2 
 gma-u.5   100802164   AP-1 complex subunit gamma-2 
 vvi-u.5   100241508   AP-1 complex subunit gamma-2 
 ppo-u.5   7468838   AP-1 complex subunit gamma-2 
 ppo-u.5   7454966   AP-1 complex subunit gamma-2 
 mtr-u.5   25501281   AP-1 complex subunit gamma-2 
 mtr-u.5   11411112   AP-1 complex subunit gamma-2 
 sly-u.5   101256586   AP-1 complex subunit gamma-2-like 
 sly-u.5   101262006   AP-1 complex subunit gamma-2-like 
 sot-r.1   102585295   AP-1 complex subunit gamma-2-like 
 sot-r.1   102584677   AP-1 complex subunit gamma-2-like 
 nta-r.1   107808228   AP-1 complex subunit gamma-2 
 nta-r.1   107773525   AP-1 complex subunit gamma-2 
 nta-r.1   107810750   AP-1 complex subunit gamma-2 
 osa-u.5   4340249   AP-1 complex subunit gamma-2 
 osa-u.5   4331060   AP-1 complex subunit gamma-2 
 zma-u.5   100501945   AP-1 complex subunit gamma-2 
 zma-u.5   100381886   AP-1 complex subunit gamma-1 
 zma-u.5   100193027   AP-1 complex subunit gamma-1 
 tae-r.2   123146015   AP-1 complex subunit gamma-2 
 tae-r.2   123128870   AP-1 complex subunit gamma-2 
 tae-r.2   123139390   AP-1 complex subunit gamma-2 
 hvu-r.1   123407263   AP-1 complex subunit gamma-2-like 
 hvu-r.1   123406266   AP-1 complex subunit gamma-2-like 
 sbi-r.1   110431058   AP-1 complex subunit gamma-2-like 
 sbi-r.1   8084666   AP-1 complex subunit gamma-2 
 bdi-r.1   100842707   AP-1 complex subunit gamma-2 
 bdi-r.1   100833599   AP-1 complex subunit gamma-2 
 cre-r.1   CHLRE_16g676650v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G60070 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G60070 (ath-m.9 coexpression data)

CoexMap"842301"


athAT1G60070 | Entrez gene ID : 842301      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 3 1 3 1 2 2 2 2 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04142 [list] [network] Lysosome (82 genes)
GO BP
GO CC
GO MF
Protein NP_001185270.1 [sequence] [blastp]
NP_176215.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  cyto 1,  golg 1,  nucl_plas 1  (predict for NP_001185270.1)
chlo 5,  nucl 2,  cyto 2,  cyto_nucl 2  (predict for NP_176215.2)
Subcellular
localization
TargetP
mito 4,  other 3  (predict for NP_001185270.1)
mito 4,  other 3  (predict for NP_176215.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G60070
ath-u.5
for
AT1G60070
ath-r.7
for
AT1G60070
ath-e.2
for
AT1G60070
ath-m.4.bio
for
AT1G60070
ath-m.4.hor
for
AT1G60070
ath-m.4.lig
for
AT1G60070
ath-m.4.str
for
AT1G60070
ath-m.4.tis
for
AT1G60070
ath-u.5
for
GAMMA-ADAPTIN 1
bra-r.6
for
103840720
bra-r.6
for
103829252
bna-r.1
for
106358107
bna-r.1
for
106367581
bna-r.1
for
106401170
ghi-r.1
for
107948540
ghi-r.1
for
107942723
ghi-r.1
for
107909653
cit-r.1
for
102628648
gma-u.5
for
100815152
gma-u.5
for
100817075
gma-u.5
for
100802164
vvi-u.5
for
100241508
ppo-u.5
for
7468838
ppo-u.5
for
7454966
mtr-u.5
for
25501281
mtr-u.5
for
11411112
sly-u.5
for
101256586
sly-u.5
for
101262006
sot-r.1
for
102585295
sot-r.1
for
102584677
nta-r.1
for
107808228
nta-r.1
for
107773525
nta-r.1
for
107810750
osa-u.5
for
4340249
osa-u.5
for
4331060
zma-u.5
for
100501945
zma-u.5
for
100381886
zma-u.5
for
100193027
tae-r.2
for
123146015
tae-r.2
for
123128870
tae-r.2
for
123139390
hvu-r.1
for
123407263
hvu-r.1
for
123406266
sbi-r.1
for
110431058
sbi-r.1
for
8084666
bdi-r.1
for
100842707
bdi-r.1
for
100833599
cre-r.1
for
CHLRE_16g676650v5


Ortholog ID: 3748
Species ath ath bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT1G60070 GAMMA-ADAPTIN 1 LOC103840720 LOC103829252 LOC106358107 LOC106367581 LOC106401170 LOC107909653 LOC107901981 LOC107945256 LOC102628648 LOC100815152 LOC100817075 LOC100802164 LOC100241508 LOC7468838 LOC7454966 LOC25501281 LOC11411112 LOC101256586 LOC101262006 LOC102585295 LOC102584677 LOC107773525 LOC107810750 LOC107790516 LOC4340249 LOC4331060 LOC100501945 LOC100381886 LOC100193027 LOC123146015 LOC123128870 LOC123139390 LOC123407263 LOC123406266 LOC110431058 LOC8084666 LOC100842707 LOC100833599 CHLRE_16g676650v5
Function* Adaptor protein complex AP-1, gamma subunit gamma-adaptin 1 AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-1-like AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-1-like AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-1 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2-like AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 AP-1 complex subunit gamma-2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04142 Lysosome 4
ath04144 Endocytosis 3
ath00100 Steroid biosynthesis 2
ath05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 5
ath04148 Efferocytosis 4
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 4
bra04144 Endocytosis 4
bra05100 Bacterial invasion of epithelial cells 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 10
bra04142 Lysosome 6
bra05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04142 Lysosome 4
bna04144 Endocytosis 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 8
ghi04144 Endocytosis 2
ghi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04142 Lysosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 4
cit04142 Lysosome 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 4
gma04142 Lysosome 4
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 4
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 4
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 3
ppo03013 Nucleocytoplasmic transport 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 4
mtr04141 Protein processing in endoplasmic reticulum 2
mtr04144 Endocytosis 2
mtr05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 6
sly04144 Endocytosis 5
sly05100 Bacterial invasion of epithelial cells 3
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04142 Lysosome 4
sly04144 Endocytosis 3
sly05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 6
sot04144 Endocytosis 6
sot05100 Bacterial invasion of epithelial cells 4
sot04141 Protein processing in endoplasmic reticulum 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 6
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00510 N-Glycan biosynthesis 3
nta00513 Various types of N-glycan biosynthesis 3
nta04141 Protein processing in endoplasmic reticulum 3
nta04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 6
nta03015 mRNA surveillance pathway 4
nta04382 Cornified envelope formation 4
nta04144 Endocytosis 2
nta05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 3
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
zma04144 Endocytosis 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 4
zma04144 Endocytosis 3
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 3
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04142 Lysosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 3
tae04142 Lysosome 3
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu05100 Bacterial invasion of epithelial cells 2
hvu04142 Lysosome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00240 Pyrimidine metabolism 2
sbi01232 Nucleotide metabolism 2
sbi04141 Protein processing in endoplasmic reticulum 2
sbi04120 Ubiquitin mediated proteolysis 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
bdi04144 Endocytosis 3
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04142 Lysosome 7
cre04144 Endocytosis 4
cre00190 Oxidative phosphorylation 2
cre04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842301 839001 103840720 103829252 106358107 106367581 106401170 107909653 107901981 107945256 102628648 100815152 100817075 100802164 100241508 7468838 7454966 25501281 11411112 101256586 101262006 102585295 102584677 107773525 107810750 107790516 4340249 4331060 100501945 100381886 100193027 123146015 123128870 123139390 123407263 123406266 110431058 8084666 100842707 100833599 5721486
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