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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-u.5   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-r.7   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-e.2   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-m.4.bio   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-m.4.hor   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-m.4.lig   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-m.4.str   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-m.4.tis   AT1G66070   Translation initiation factor eIF3 subunit 
 ath-u.5   AT5G37475   Translation initiation factor eIF3 subunit 
 bra-r.6   103852306   eukaryotic translation initiation factor 3 subunit J 
 bra-r.6   103863717   eukaryotic translation initiation factor 3 subunit J 
 bra-r.6   103831084   eukaryotic translation initiation factor 3 subunit J 
 bna-r.1   106446340   eukaryotic translation initiation factor 3 subunit J 
 bna-r.1   106381334   eukaryotic translation initiation factor 3 subunit J 
 bna-r.1   106376488   eukaryotic translation initiation factor 3 subunit J 
 ghi-r.1   107940913   eukaryotic translation initiation factor 3 subunit J 
 ghi-r.1   107911951   eukaryotic translation initiation factor 3 subunit J 
 ghi-r.1   107926437   eukaryotic translation initiation factor 3 subunit J 
 cit-r.1   102610104   uncharacterized LOC102610104 
 gma-u.5   100775181   eukaryotic translation initiation factor 3 subunit J 
 gma-u.5   100783973   eukaryotic translation initiation factor 3 subunit J 
 vvi-u.5   100242541   uncharacterized LOC100242541 
 ppo-u.5   18106562   uncharacterized LOC18106562 
 ppo-u.5   7493579   uncharacterized LOC7493579 
 mtr-u.5   25497362   eukaryotic translation initiation factor 3 subunit J 
 sly-u.5   101255357   uncharacterized LOC101255357 
 sot-r.1   102592326   eukaryotic translation initiation factor 3 subunit J-A 
 nta-r.1   107771174   uncharacterized LOC107771174 
 nta-r.1   107799095   uncharacterized LOC107799095 
 nta-r.1   107760667   uncharacterized LOC107760667 
 osa-u.5   4328129   uncharacterized LOC4328129 
 osa-u.5   4339203   uncharacterized LOC4339203 
 zma-u.5   100283844   uncharacterized LOC100283844 
 zma-u.5   100283402   eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa 
 tae-r.2   123131878   eukaryotic translation initiation factor 3 subunit J-A 
 tae-r.2   123135849   eukaryotic translation initiation factor 3 subunit J-A 
 tae-r.2   123143372   eukaryotic translation initiation factor 3 subunit J-A 
 hvu-r.1   123402047   eukaryotic translation initiation factor 3 subunit J-A-like 
 sbi-r.1   8055041   eukaryotic translation initiation factor 3 subunit J-A 
 bdi-r.1   100834330   eukaryotic translation initiation factor 3 subunit J-A 
 cre-r.1   CHLRE_06g308850v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G66070 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G66070 (ath-m.9 coexpression data)

CoexMap"842921"


athAT1G66070 | Entrez gene ID : 842921      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 2 1 2 1 1 1 3 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
Protein NP_001185326.1 [sequence] [blastp]
NP_564865.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cysk_nucl 3,  cyto 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_001185326.1)
nucl 5,  cysk_nucl 3,  cyto 2,  mito 1,  plas 1,  extr 1,  mito_plas 1  (predict for NP_564865.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001185326.1)
other 9  (predict for NP_564865.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
AT1G66070
ath-u.5
for
AT1G66070
ath-r.7
for
AT1G66070
ath-e.2
for
AT1G66070
ath-m.4.bio
for
AT1G66070
ath-m.4.hor
for
AT1G66070
ath-m.4.lig
for
AT1G66070
ath-m.4.str
for
AT1G66070
ath-m.4.tis
for
AT1G66070
ath-u.5
for
AT5G37475
bra-r.6
for
103852306
bra-r.6
for
103863717
bra-r.6
for
103831084
bna-r.1
for
106446340
bna-r.1
for
106381334
bna-r.1
for
106376488
ghi-r.1
for
107940913
ghi-r.1
for
107911951
ghi-r.1
for
107926437
cit-r.1
for
102610104
gma-u.5
for
100775181
gma-u.5
for
100783973
vvi-u.5
for
100242541
ppo-u.5
for
18106562
ppo-u.5
for
7493579
mtr-u.5
for
25497362
sly-u.5
for
101255357
sot-r.1
for
102592326
nta-r.1
for
107771174
nta-r.1
for
107799095
nta-r.1
for
107760667
osa-u.5
for
4328129
osa-u.5
for
4339203
zma-u.5
for
100283844
zma-u.5
for
100283402
tae-r.2
for
123131878
tae-r.2
for
123135849
tae-r.2
for
123143372
hvu-r.1
for
123402047
sbi-r.1
for
8055041
bdi-r.1
for
100834330
cre-r.1
for
CHLRE_06g308850v5


Ortholog ID: 3982
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT1G66070 AT5G37475 LOC103852306 LOC103831084 LOC103864143 LOC106446340 LOC106381334 LOC106376488 LOC107940913 LOC107911951 LOC107933246 LOC102610104 LOC100775181 LOC100783973 LOC100242541 LOC18106562 LOC7493579 LOC25497362 LOC101255357 LOC102592326 LOC107771174 LOC107760667 LOC107831054 LOC4328129 LOC4339203 LOC100283844 LOC100283402 LOC123131878 LOC123135849 LOC123143372 LOC123402047 LOC8055041 LOC100834330 CHLRE_06g308850v5
Function* Translation initiation factor eIF3 subunit Translation initiation factor eIF3 subunit eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J uncharacterized LOC102610104 eukaryotic translation initiation factor 3 subunit J eukaryotic translation initiation factor 3 subunit J uncharacterized LOC100242541 uncharacterized LOC18106562 uncharacterized LOC7493579 eukaryotic translation initiation factor 3 subunit J uncharacterized LOC101255357 eukaryotic translation initiation factor 3 subunit J-A uncharacterized LOC107771174 uncharacterized LOC107760667 uncharacterized LOC107831054 uncharacterized LOC4328129 uncharacterized LOC4339203 uncharacterized LOC100283844 eukaryotic translation initiation factor 3 subunit 1 alpha, 35kDa eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A-like eukaryotic translation initiation factor 3 subunit J-A eukaryotic translation initiation factor 3 subunit J-A uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath03015 mRNA surveillance pathway 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra04075 Plant hormone signal transduction 2
bra00020 Citrate cycle (TCA cycle) 2
bra00310 Lysine degradation 2
bra00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 9
bna03018 RNA degradation 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi00020 Citrate cycle (TCA cycle) 4
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00620 Pyruvate metabolism 2
ghi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 2
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00230 Purine metabolism 2
gma00730 Thiamine metabolism 2
gma01232 Nucleotide metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 4
nta04141 Protein processing in endoplasmic reticulum 4
nta04144 Endocytosis 4
nta03018 RNA degradation 4
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 4
tae03018 RNA degradation 3
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
tae04141 Protein processing in endoplasmic reticulum 4
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00020 Citrate cycle (TCA cycle) 5
hvu01200 Carbon metabolism 5
hvu00270 Cysteine and methionine metabolism 4
hvu00710 Carbon fixation by Calvin cycle 4
hvu03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842921 833725 103852306 103831084 103864143 106446340 106381334 106376488 107940913 107911951 107933246 102610104 100775181 100783973 100242541 18106562 7493579 25497362 101255357 102592326 107771174 107760667 107831054 4328129 4339203 100283844 100283402 123131878 123135849 123143372 123402047 8055041 100834330 5716834
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