ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-u.5	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-r.7	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-e.2	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-m.4.bio	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-m.4.hor	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-m.4.lig	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-m.4.str	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
ath-m.4.tis	AT1G73200	testis-expressed sequence 2-like protein (DUF2404)
bra-r.6	103852830	uncharacterized LOC103852830
bra-r.6	103842732	uncharacterized LOC103842732
bra-r.6	103831800	testis-expressed protein 2
bna-r.1	106346844	uncharacterized LOC106346844
bna-r.1	106354253	testis-expressed protein 2
bna-r.1	125591270	uncharacterized LOC125591270
ghi-r.1	121230797	uncharacterized LOC121230797
ghi-r.1	107941163	testis-expressed protein 2
ghi-r.1	107962393	uncharacterized LOC107962393
cit-r.1	102630242	uncharacterized LOC102630242
gma-u.5	100816218	uncharacterized LOC100816218
gma-u.5	100787320	uncharacterized LOC100787320
gma-u.5	100812281	uncharacterized LOC100812281
vvi-u.5	100244234	uncharacterized LOC100244234
ppo-u.5	18106704	uncharacterized LOC18106704
ppo-u.5	18107912	uncharacterized LOC18107912
mtr-u.5	25484538	testis-expressed protein 2
mtr-u.5	25496616	uncharacterized LOC25496616
sly-u.5	101251098	uncharacterized LOC101251098
sly-u.5	101250278	uncharacterized LOC101250278
sot-r.1	102588484	uncharacterized LOC102588484
sot-r.1	102602040	uncharacterized LOC102602040
nta-r.1	107772136	uncharacterized LOC107772136
nta-r.1	107776806	uncharacterized LOC107776806
nta-r.1	107816513	uncharacterized LOC107816513
osa-u.5	9267532	uncharacterized LOC9267532
zma-u.5	103626492	uncharacterized LOC103626492
zma-u.5	100279080	uncharacterized LOC100279080
tae-r.2	123181068	uncharacterized LOC123181068
tae-r.2	123140055	testis-expressed protein 2
tae-r.2	123146302	testis-expressed protein 2
hvu-r.1	123406250	testis-expressed protein 2-like
hvu-r.1	123402658	testis-expressed protein 2-like
sbi-r.1	8066396	testis-expressed protein 2
sbi-r.1	8084449	testis-expressed protein 2
bdi-r.1	100837943	testis-expressed protein 2
bdi-r.1	100838103	testis-expressed protein 2
cre-r.1	CHLRE_06g285700v5	uncharacterized protein

Top 50 coexpressed genes to AT1G73200 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G73200 (ath-m.9 coexpression data)

CoexMap"843654"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0007165 [list] [network] signal transduction

(1102 genes)

ISS

GO CC

GO:0000325 [list] [network] plant-type vacuole	(788 genes)	HDA
GO:0005783 [list] [network] endoplasmic reticulum	(897 genes)	HDA

GO MF

GO:0035091 [list] [network] phosphatidylinositol binding

(93 genes)

ISS

Protein

NP_177463.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, extr 2, nucl 1, vacu 1

(predict for NP_177463.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_177463.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT1G73200	ath-u.5 for AT1G73200	ath-r.7 for AT1G73200	ath-e.2 for AT1G73200	ath-m.4.bio for AT1G73200	ath-m.4.hor for AT1G73200	ath-m.4.lig for AT1G73200	ath-m.4.str for AT1G73200	ath-m.4.tis for AT1G73200	bra-r.6 for 103852830	bra-r.6 for 103842732	bra-r.6 for 103831800	bna-r.1 for 106346844	bna-r.1 for 106354253	bna-r.1 for 125591270	ghi-r.1 for 121230797	ghi-r.1 for 107941163	ghi-r.1 for 107962393	cit-r.1 for 102630242	gma-u.5 for 100816218	gma-u.5 for 100787320	gma-u.5 for 100812281	vvi-u.5 for 100244234	ppo-u.5 for 18106704	ppo-u.5 for 18107912	mtr-u.5 for 25484538	mtr-u.5 for 25496616	sly-u.5 for 101251098	sly-u.5 for 101250278	sot-r.1 for 102588484	sot-r.1 for 102602040	nta-r.1 for 107772136	nta-r.1 for 107776806	nta-r.1 for 107816513	osa-u.5 for 9267532	zma-u.5 for 103626492	zma-u.5 for 100279080	tae-r.2 for 123181068	tae-r.2 for 123140055	tae-r.2 for 123146302	hvu-r.1 for 123406250	hvu-r.1 for 123402658	sbi-r.1 for 8066396	sbi-r.1 for 8084449	bdi-r.1 for 100837943	bdi-r.1 for 100838103	cre-r.1 for CHLRE_06g285700v5

Ortholog

Ortholog ID: 2951

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

testis-expressed sequence 2-like protein (DUF2404)

uncharacterized LOC103852830

uncharacterized LOC103842732

uncharacterized LOC103872560

uncharacterized LOC106369036

testis-expressed protein 2-like

testis-expressed protein 2

uncharacterized LOC107962393

testis-expressed protein 2

uncharacterized LOC102630242

uncharacterized LOC100816218

uncharacterized LOC100787320

uncharacterized LOC100812281

uncharacterized LOC100244234

uncharacterized LOC18106704

uncharacterized LOC18107912

testis-expressed protein 2

uncharacterized LOC25496616

uncharacterized LOC101251098

uncharacterized LOC101250278

uncharacterized LOC102588484

uncharacterized LOC102602040

uncharacterized LOC107776806

uncharacterized LOC107816513

uncharacterized LOC107827670

uncharacterized LOC9267532

uncharacterized LOC103626492

uncharacterized LOC100279080

uncharacterized LOC123181068

testis-expressed protein 2

testis-expressed protein 2-like

testis-expressed protein 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2
ppo04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2
sly00564	Glycerophospholipid metabolism	2
sly04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	6
nta04626	Plant-pathogen interaction	6
nta03015	mRNA surveillance pathway	2
nta04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03013	Nucleocytoplasmic transport	2
zma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00562	Inositol phosphate metabolism	3
tae04070	Phosphatidylinositol signaling system	3
tae04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04075	Plant hormone signal transduction	3
hvu04016	MAPK signaling pathway - plant	2
hvu04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	2
bdi04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

843654

103852830

103842732

103872560

106369036

106427149

106406411

107941163

107962393

107906331

102630242

100816218

100787320

100812281

100244234

18106704

18107912

25484538

25496616

101251098

101250278

102588484

102602040

107776806

107816513

107827670

9267532

103626492

100279080

123181068

123129138

123132426

123402658

8066396

8084449

100837943

100838103

5721002

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Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	9	3	3	3	1	3	1	2	2	2	2	3	1	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G73200 (ath-m.9 coexpression data)

Top 50 enrichment test to AT1G73200 (ath-m.9 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**