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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   emb2184   Ribosomal protein L31 
 ath-u.5   emb2184   Ribosomal protein L31 
 ath-r.7   emb2184   Ribosomal protein L31 
 ath-e.2   emb2184   Ribosomal protein L31 
 ath-m.4.bio   emb2184   Ribosomal protein L31 
 ath-m.4.hor   emb2184   Ribosomal protein L31 
 ath-m.4.lig   emb2184   Ribosomal protein L31 
 ath-m.4.str   emb2184   Ribosomal protein L31 
 ath-m.4.tis   emb2184   Ribosomal protein L31 
 bra-r.6   103866625   50S ribosomal protein L31, chloroplastic 
 bra-r.6   103831990   50S ribosomal protein L31, chloroplastic 
 bna-r.1   106431549   50S ribosomal protein L31, chloroplastic 
 bna-r.1   106406677   50S ribosomal protein L31, chloroplastic-like 
 bna-r.1   106354500   50S ribosomal protein L31, chloroplastic-like 
 ghi-r.1   107957961   50S ribosomal protein L31, chloroplastic 
 ghi-r.1   107905445   50S ribosomal protein L31, chloroplastic 
 cit-r.1   102619872   50S ribosomal protein L31, chloroplastic 
 gma-u.5   100782305   50S ribosomal protein L31, chloroplastic-like 
 gma-u.5   100499959   uncharacterized LOC100499959 
 vvi-u.5   100250681   large ribosomal subunit protein bL31c 
 ppo-u.5   18096115   50S ribosomal protein L31, chloroplastic 
 mtr-u.5   25482170   50S ribosomal protein L31, chloroplastic 
 sly-u.5   101245942   large ribosomal subunit protein bL31c 
 sot-r.1   102598906   50S ribosomal protein L31, chloroplastic 
 nta-r.1   107799884   large ribosomal subunit protein bL31c-like 
 nta-r.1   107777917   large ribosomal subunit protein bL31c 
 osa-u.5   4326593   uncharacterized LOC4326593 
 zma-u.5   100216899   50S ribosomal protein L31, chloroplastic-like 
 tae-r.2   123070188   50S ribosomal protein L31 
 tae-r.2   123061555   50S ribosomal protein L31 
 tae-r.2   123078631   50S ribosomal protein L31 
 hvu-r.1   123443935   50S ribosomal protein L31 
 sbi-r.1   8054924   50S ribosomal protein L31, chloroplastic 
 bdi-r.1   100845083   50S ribosomal protein L31 
 cre-r.1   CHLRE_08g365400v5   uncharacterized protein 

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Top 50 coexpressed genes to emb2184 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to emb2184 (ath-m.9 coexpression data)

CoexMap"843871"


athemb2184 | Entrez gene ID : 843871      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  NAS  
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA ISM  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (75 genes)  IEA  
Protein NP_565109.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_565109.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_565109.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
emb2184
ath-u.5
for
emb2184
ath-r.7
for
emb2184
ath-e.2
for
emb2184
ath-m.4.bio
for
emb2184
ath-m.4.hor
for
emb2184
ath-m.4.lig
for
emb2184
ath-m.4.str
for
emb2184
ath-m.4.tis
for
emb2184
bra-r.6
for
103866625
bra-r.6
for
103831990
bna-r.1
for
106431549
bna-r.1
for
106406677
bna-r.1
for
106354500
ghi-r.1
for
107957961
ghi-r.1
for
107905445
cit-r.1
for
102619872
gma-u.5
for
100782305
gma-u.5
for
100499959
vvi-u.5
for
100250681
ppo-u.5
for
18096115
mtr-u.5
for
25482170
sly-u.5
for
101245942
sot-r.1
for
102598906
nta-r.1
for
107799884
nta-r.1
for
107777917
osa-u.5
for
4326593
zma-u.5
for
100216899
tae-r.2
for
123070188
tae-r.2
for
123061555
tae-r.2
for
123078631
hvu-r.1
for
123443935
sbi-r.1
for
8054924
bdi-r.1
for
100845083
cre-r.1
for
CHLRE_08g365400v5


Ortholog ID: 7856
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol emb2184 LOC103866625 LOC103831990 LOC106431549 LOC106406677 LOC106354500 LOC107957961 LOC107905445 LOC102619872 LOC100782305 LOC100499959 LOC100250681 LOC18096115 LOC25482170 LOC101245942 LOC102598906 LOC107799884 LOC107777917 LOC4326593 LOC100216899 LOC123070188 LOC123061555 LOC123078631 LOC123443935 LOC8054924 LOC100845083 CHLRE_08g365400v5
Function* Ribosomal protein L31 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic-like 50S ribosomal protein L31, chloroplastic-like 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic-like uncharacterized LOC100499959 large ribosomal subunit protein bL31c 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31, chloroplastic large ribosomal subunit protein bL31c 50S ribosomal protein L31, chloroplastic large ribosomal subunit protein bL31c-like large ribosomal subunit protein bL31c uncharacterized LOC4326593 50S ribosomal protein L31, chloroplastic-like 50S ribosomal protein L31 50S ribosomal protein L31 50S ribosomal protein L31 50S ribosomal protein L31 50S ribosomal protein L31, chloroplastic 50S ribosomal protein L31 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 8
nta00480 Glutathione metabolism 2
nta00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 9
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843871 103866625 103831990 106431549 106406677 106354500 107957961 107905445 102619872 100782305 100499959 100250681 18096115 25482170 101245942 102598906 107799884 107777917 4326593 100216899 123070188 123061555 123078631 123443935 8054924 100845083 5721650
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