ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.9	AT1G76590	PLATZ transcription factor family protein
ath-u.5	AT1G76590	PLATZ transcription factor family protein
ath-r.7	AT1G76590	PLATZ transcription factor family protein
ath-e.2	AT1G76590	PLATZ transcription factor family protein
ath-m.4.bio	AT1G76590	PLATZ transcription factor family protein
ath-m.4.hor	AT1G76590	PLATZ transcription factor family protein
ath-m.4.lig	AT1G76590	PLATZ transcription factor family protein
ath-m.4.str	AT1G76590	PLATZ transcription factor family protein
ath-m.4.tis	AT1G76590	PLATZ transcription factor family protein
ath-u.5	AT2G12646	PLATZ transcription factor family protein
bra-r.6	103853738	uncharacterized LOC103853738
bna-r.1	106441926	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
bna-r.1	106376055	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107911898	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107912180	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
ghi-r.1	107918054	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
cit-r.1	102606851	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
cit-r.1	102616377	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
gma-u.5	100791221	uncharacterized LOC100791221
gma-u.5	100792668	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
vvi-u.5	100855200	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
vvi-u.5	100246080	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
mtr-u.5	11430511	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
mtr-u.5	11418769	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
sly-u.5	101268004	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
sly-u.5	101268014	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
sot-r.1	102599612	uncharacterized LOC102599612
sot-r.1	102593997	uncharacterized LOC102593997
sot-r.1	102600336	uncharacterized LOC102600336
nta-r.1	107798225	uncharacterized LOC107798225
nta-r.1	107793937	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
osa-u.5	9268257	uncharacterized LOC9268257
osa-u.5	4346322	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
zma-u.5	100276787	uncharacterized LOC100276787
zma-u.5	100284599	zinc-binding protein
zma-u.5	100277057	uncharacterized LOC100277057
tae-r.2	123066774	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
tae-r.2	123162507	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
tae-r.2	123167559	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
hvu-r.1	123427883	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1-like
hvu-r.1	123402929	protein RGF1 INDUCIBLE TRANSCRIPTION FACTOR 1
sbi-r.1	110435101	uncharacterized LOC110435101
bdi-r.1	100836170	uncharacterized LOC100836170
bdi-r.1	100832335	uncharacterized LOC100832335
cre-r.1	CHLRE_16g650400v5	uncharacterized protein

Top 50 coexpressed genes to AT1G76590 (ath-m.9 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT1G76590 (ath-m.9 coexpression data)

CoexMap"843992"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

Protein

NP_565135.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 3

(predict for NP_565135.1)

Subcellular
localization
TargetP

other 9

(predict for NP_565135.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.9 for AT1G76590	ath-u.5 for AT1G76590	ath-r.7 for AT1G76590	ath-e.2 for AT1G76590	ath-m.4.bio for AT1G76590	ath-m.4.hor for AT1G76590	ath-m.4.lig for AT1G76590	ath-m.4.str for AT1G76590	ath-m.4.tis for AT1G76590	ath-u.5 for AT2G12646	bra-r.6 for 103853738	bna-r.1 for 106441926	bna-r.1 for 106376055	ghi-r.1 for 107911898	ghi-r.1 for 107912180	ghi-r.1 for 107918054	cit-r.1 for 102606851	cit-r.1 for 102616377	gma-u.5 for 100791221	gma-u.5 for 100792668	vvi-u.5 for 100855200	vvi-u.5 for 100246080	mtr-u.5 for 11430511	mtr-u.5 for 11418769	sly-u.5 for 101268004	sly-u.5 for 101268014	sot-r.1 for 102599612	sot-r.1 for 102593997	sot-r.1 for 102600336	nta-r.1 for 107798225	nta-r.1 for 107793937	osa-u.5 for 9268257	osa-u.5 for 4346322	zma-u.5 for 100276787	zma-u.5 for 100284599	zma-u.5 for 100277057	tae-r.2 for 123066774	tae-r.2 for 123162507	tae-r.2 for 123167559	hvu-r.1 for 123427883	hvu-r.1 for 123402929	sbi-r.1 for 110435101	bdi-r.1 for 100836170	bdi-r.1 for 100832335	cre-r.1 for CHLRE_16g650400v5

Ortholog

Ortholog ID: 82

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

PLATZ transcription factor family protein

uncharacterized LOC103827715