Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.9   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-r.7   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-e.2   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.bio   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.hor   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.lig   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.str   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-m.4.tis   PDE318   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 bra-r.6   103832456   nucleolar GTP-binding protein 1 
 bra-r.6   103830456   nucleolar GTP-binding protein 1 
 bna-r.1   106430761   GTP-binding protein 4 
 bna-r.1   106402349   GTP-binding protein 4-like 
 bna-r.1   106353382   GTP-binding protein 4-like 
 ghi-r.1   107933663   nucleolar GTP-binding protein 1 
 ghi-r.1   107890916   nucleolar GTP-binding protein 1 
 cit-r.1   102611795   uncharacterized LOC102611795 
 gma-u.5   100794359   nucleolar GTP-binding protein 1 
 vvi-u.5   100263244   uncharacterized LOC100263244 
 ppo-u.5   7453904   uncharacterized LOC7453904 
 mtr-u.5   25499910   nucleolar GTP-binding protein 1 
 sly-u.5   101259578   nucleolar GTP-binding protein 1 
 sot-r.1   102606333   nucleolar GTP-binding protein 1 
 nta-r.1   107778132   uncharacterized LOC107778132 
 nta-r.1   107777720   nucleolar GTP-binding protein 1-like 
 osa-u.5   4344710   nucleolar GTP-binding protein 1 
 zma-u.5   100285001   nucleolar GTP-binding protein 1 
 tae-r.2   123143284   GTP-binding protein 4 
 tae-r.2   123135719   GTP-binding protein 4 
 tae-r.2   123131815   GTP-binding protein 4 
 hvu-r.1   123401932   GTP-binding protein 4 
 sbi-r.1   8065497   uncharacterized LOC8065497 
 sbi-r.1   8080848   nucleolar GTP-binding protein 1 
 sbi-r.1   8074422   nucleolar GTP-binding protein 1 
 bdi-r.1   100837400   nucleolar GTP-binding protein 1 
 cre-r.1   CHLRE_08g384355v5   uncharacterized protein 

close


Top 50 coexpressed genes to PDE318 (ath-m.9 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to PDE318 (ath-m.9 coexpression data)

CoexMap"844416"


athPDE318 | Entrez gene ID : 844416      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 1 1 1 2 1 1 3 1 3 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03008 [list] [network] Ribosome biogenesis in eukaryotes (98 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005525 [list] [network] GTP binding  (83 genes)  IEA  
Protein NP_001185451.1 [sequence] [blastp]
NP_001320866.1 [sequence] [blastp]
NP_001320867.1 [sequence] [blastp]
NP_001320868.1 [sequence] [blastp]
NP_001320869.1 [sequence] [blastp]
NP_178192.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 2,  chlo_mito 2,  nucl 1,  cyto 1,  cyto_nucl 1,  mito_plas 1  (predict for NP_001185451.1)
chlo 7,  nucl 1,  plas 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1  (predict for NP_001320866.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001320867.1)
chlo 6,  mito 2,  nucl 1  (predict for NP_001320868.1)
chlo 8,  chlo_mito 5,  mito 1  (predict for NP_001320869.1)
chlo 9,  chlo_mito 5  (predict for NP_178192.1)
Subcellular
localization
TargetP
other 5  (predict for NP_001185451.1)
chlo 3  (predict for NP_001320866.1)
chlo 3,  mito 3  (predict for NP_001320867.1)
chlo 7,  mito 3  (predict for NP_001320868.1)
chlo 8  (predict for NP_001320869.1)
chlo 5,  mito 3  (predict for NP_178192.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.9
for
PDE318
ath-u.5
for
PDE318
ath-r.7
for
PDE318
ath-e.2
for
PDE318
ath-m.4.bio
for
PDE318
ath-m.4.hor
for
PDE318
ath-m.4.lig
for
PDE318
ath-m.4.str
for
PDE318
ath-m.4.tis
for
PDE318
bra-r.6
for
103832456
bra-r.6
for
103830456
bna-r.1
for
106430761
bna-r.1
for
106402349
bna-r.1
for
106353382
ghi-r.1
for
107933663
ghi-r.1
for
107890916
cit-r.1
for
102611795
gma-u.5
for
100794359
vvi-u.5
for
100263244
ppo-u.5
for
7453904
mtr-u.5
for
25499910
sly-u.5
for
101259578
sot-r.1
for
102606333
nta-r.1
for
107778132
nta-r.1
for
107777720
osa-u.5
for
4344710
zma-u.5
for
100285001
tae-r.2
for
123143284
tae-r.2
for
123135719
tae-r.2
for
123131815
hvu-r.1
for
123401932
sbi-r.1
for
8065497
sbi-r.1
for
8080848
sbi-r.1
for
8074422
bdi-r.1
for
100837400
cre-r.1
for
CHLRE_08g384355v5


Ortholog ID: 8322
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi sbi bdi cre
Symbol PDE318 LOC103832456 LOC103830456 LOC106430761 LOC106402349 LOC106354825 LOC107933663 LOC107890916 LOC102611795 LOC100794359 LOC100263244 LOC7453904 LOC25499910 LOC101259578 LOC102606333 LOC107778132 LOC107777720 LOC4344710 LOC100285001 LOC123143284 LOC123135719 LOC123131815 LOC123401932 LOC8065497 LOC8080848 LOC8074422 LOC100837400 CHLRE_08g384355v5
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 GTP-binding protein 4 GTP-binding protein 4-like GTP-binding protein 4 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 uncharacterized LOC102611795 nucleolar GTP-binding protein 1 uncharacterized LOC100263244 uncharacterized LOC7453904 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 uncharacterized LOC107778132 nucleolar GTP-binding protein 1-like nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 GTP-binding protein 4 GTP-binding protein 4 GTP-binding protein 4 GTP-binding protein 4 uncharacterized LOC8065497 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 nucleolar GTP-binding protein 1 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra04141 Protein processing in endoplasmic reticulum 3
bra03040 Spliceosome 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03013 Nucleocytoplasmic transport 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna00920 Sulfur metabolism 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00540 Lipopolysaccharide biosynthesis 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00270 Cysteine and methionine metabolism 2
mtr01230 Biosynthesis of amino acids 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta03015 mRNA surveillance pathway 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 6
nta03015 mRNA surveillance pathway 2
nta00450 Selenocompound metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 3
zma04141 Protein processing in endoplasmic reticulum 2
zma03018 RNA degradation 2
zma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00270 Cysteine and methionine metabolism 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 3
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
sbi03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844416 103832456 103830456 106430761 106402349 106354825 107933663 107890916 102611795 100794359 100263244 7453904 25499910 101259578 102606333 107778132 107777720 4344710 100285001 123143284 123135719 123131815 123401932 8065497 8080848 8074422 100837400 5719810
The preparation time of this page was 0.1 [sec].