ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-r.6	4332353	uncharacterized LOC4332353
osa-u.5	4332353	uncharacterized LOC4332353
osa-m.8	4332353	uncharacterized LOC4332353
osa-e.1	4332353	uncharacterized LOC4332353
osa-u.5	4338962	uncharacterized LOC4338962
tae-r.2	123092657	uncharacterized LOC123092657
tae-r.2	123097961	uncharacterized LOC123097961
hvu-r.1	123449068	uncharacterized LOC123449068
bdi-r.1	100844918	uncharacterized LOC100844918
bdi-r.1	100824988	uncharacterized LOC100824988
zma-u.5	100276084	uncharacterized LOC100276084
zma-u.5	100275298	uncharacterized LOC100275298
sbi-r.1	8081532	uncharacterized LOC8081532
sbi-r.1	8072519	uncharacterized LOC8072519
ath-u.5	MEE59	maternal effect embryo arrest 59
gma-u.5	100306349	uncharacterized LOC100306349
gma-u.5	100805584	uncharacterized LOC100805584
gma-u.5	100806219	uncharacterized LOC100806219
sly-u.5	101250067	uncharacterized LOC101250067
sly-u.5	101264428	uncharacterized LOC101264428
bra-r.6	103861189	uncharacterized LOC103861189
vvi-u.5	100264533	uncharacterized LOC100264533
vvi-u.5	100258718	uncharacterized LOC100258718
ppo-u.5	18101167	uncharacterized LOC18101167
ppo-u.5	7481500	uncharacterized LOC7481500
mtr-u.5	25490762	uncharacterized LOC25490762
mtr-u.5	11410589	uncharacterized LOC11410589
ghi-r.1	121224096	uncharacterized LOC121224096
ghi-r.1	121224636	uncharacterized LOC121224636
ghi-r.1	107935294	uncharacterized LOC107935294
bna-r.1	106426869	uncharacterized LOC106426869
bna-r.1	106426815	uncharacterized LOC106426815
bna-r.1	BNAC07G46460D	uncharacterized BNAC07G46460D
sot-r.1	102601541	uncharacterized LOC102601541
cit-r.1	102625103	hypothetical protein
cit-r.1	102629509	uncharacterized LOC102629509
nta-r.1	107804229	uncharacterized LOC107804229
nta-r.1	107782933	uncharacterized LOC107782933
nta-r.1	107775564	uncharacterized LOC107775564

Top 50 coexpressed genes to 4332353 (osa-r.6 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4332353 (osa-r.6 coexpression data)

CoexMap"4332353"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015632823.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 3

(predict for XP_015632823.1)

Subcellular
localization
TargetP

other 6

(predict for XP_015632823.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-r.6 for 4332353	osa-u.5 for 4332353	osa-m.8 for 4332353	osa-e.1 for 4332353	osa-u.5 for 4338962	tae-r.2 for 123092657	tae-r.2 for 123097961	hvu-r.1 for 123449068	bdi-r.1 for 100844918	bdi-r.1 for 100824988	zma-u.5 for 100276084	zma-u.5 for 100275298	sbi-r.1 for 8081532	sbi-r.1 for 8072519	ath-u.5 for MEE59	gma-u.5 for 100306349	gma-u.5 for 100805584	gma-u.5 for 100806219	sly-u.5 for 101250067	sly-u.5 for 101264428	bra-r.6 for 103861189	vvi-u.5 for 100264533	vvi-u.5 for 100258718	ppo-u.5 for 18101167	ppo-u.5 for 7481500	mtr-u.5 for 25490762	mtr-u.5 for 11410589	ghi-r.1 for 121224096	ghi-r.1 for 121224636	ghi-r.1 for 107935294	bna-r.1 for 106426869	bna-r.1 for 106426815	bna-r.1 for BNAC07G46460D	sot-r.1 for 102601541	cit-r.1 for 102625103	cit-r.1 for 102629509	nta-r.1 for 107804229	nta-r.1 for 107782933	nta-r.1 for 107775564

Ortholog

Ortholog ID: 4777

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

MEE59

Function^*

uncharacterized LOC4332353

uncharacterized LOC4338962

uncharacterized LOC123097961

uncharacterized LOC123085384

uncharacterized LOC123449068

uncharacterized LOC100844918

uncharacterized LOC100824988

uncharacterized LOC100276084

uncharacterized LOC100275298

uncharacterized LOC8081532

uncharacterized LOC8072519

maternal effect embryo arrest 59

uncharacterized LOC100306349

uncharacterized LOC100806219

LRR receptor-like serine/threonine-protein kinase SIK1

uncharacterized LOC101250067

uncharacterized LOC101264428

uncharacterized LOC103861189

uncharacterized LOC100264533

uncharacterized LOC100258718

uncharacterized LOC18101167

uncharacterized LOC7481500

uncharacterized LOC25490762

uncharacterized LOC11410589

uncharacterized LOC121224096

uncharacterized LOC107935294

uncharacterized LOC107950213

uncharacterized LOC106426869

uncharacterized LOC106426815

uncharacterized BNAC07G46460D

uncharacterized LOC102601541

hypothetical protein

uncharacterized LOC102629509

uncharacterized LOC107804229

uncharacterized LOC107782933

uncharacterized LOC107775564

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	4
osa00030	Pentose phosphate pathway	4
osa00051	Fructose and mannose metabolism	3
osa00710	Carbon fixation by Calvin cycle	3
osa01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00600	Sphingolipid metabolism	3
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00280	Valine, leucine and isoleucine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00730	Thiamine metabolism	3
sbi01240	Biosynthesis of cofactors	3
sbi04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	3
ath00910	Nitrogen metabolism	3
ath01310	Nitrogen cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	6
gma01200	Carbon metabolism	4
gma01230	Biosynthesis of amino acids	4
gma00620	Pyruvate metabolism	4
gma00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00010	Glycolysis / Gluconeogenesis	4
sly01200	Carbon metabolism	2
sly01230	Biosynthesis of amino acids	2
sly00270	Cysteine and methionine metabolism	2
sly00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3
ppo04141	Protein processing in endoplasmic reticulum	3
ppo03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00500	Starch and sucrose metabolism	3
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00071	Fatty acid degradation	4
ghi00350	Tyrosine metabolism	4
ghi00592	alpha-Linolenic acid metabolism	4
ghi00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00010	Glycolysis / Gluconeogenesis	4
ghi00071	Fatty acid degradation	3
ghi00350	Tyrosine metabolism	3
ghi00592	alpha-Linolenic acid metabolism	3
ghi00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04712	Circadian rhythm - plant	2
ghi04120	Ubiquitin mediated proteolysis	2
ghi00730	Thiamine metabolism	2
ghi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot00380	Tryptophan metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	4
cit00030	Pentose phosphate pathway	2
cit00051	Fructose and mannose metabolism	2
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00010	Glycolysis / Gluconeogenesis	4
nta00071	Fatty acid degradation	2
nta00350	Tyrosine metabolism	2
nta00592	alpha-Linolenic acid metabolism	2
nta00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta00970	Aminoacyl-tRNA biosynthesis	2
nta04016	MAPK signaling pathway - plant	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

4332353

4338962

123097961

123085384

123449068

100844918

100824988

100276084

100275298

8081532

8072519

829885

100306349

100806219

106796659

101250067

101264428

103861189

100264533

100258718

18101167

7481500

25490762

11410589

121224096

107935294

107950213

106426869

106426815

106406943

102601541

102625103

102629509

107804229

107782933

107775564

The preparation time of this page was 0.1 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	5	2	1	2	2	2	1	3	2	1	2	2	2	3	3	1	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4332353 (osa-r.6 coexpression data)

Top 50 enrichment test to 4332353 (osa-r.6 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**