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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-r.6   4334538   uncharacterized LOC4334538 
 osa-u.5   4334538   uncharacterized LOC4334538 
 osa-m.8   4334538   uncharacterized LOC4334538 
 osa-e.1   4334538   uncharacterized LOC4334538 
 tae-r.2   123123407   uncharacterized LOC123123407 
 tae-r.2   123113900   uncharacterized LOC123113900 
 tae-r.2   123105591   uncharacterized LOC123105591 
 hvu-r.1   123452936   uncharacterized LOC123452936 
 bdi-r.1   100844410   uncharacterized LOC100844410 
 zma-u.5   103644241   BRCA1 C Terminus domain containing protein expressed 
 sbi-r.1   8057397   uncharacterized LOC8057397 
 gma-u.5   100808072   uncharacterized LOC100808072 
 sly-u.5   101260553   uncharacterized LOC101260553 
 vvi-u.5   100245338   uncharacterized LOC100245338 
 ppo-u.5   7460263   uncharacterized LOC7460263 
 mtr-u.5   11413332   uncharacterized LOC11413332 
 ghi-r.1   121207630   uncharacterized LOC121207630 
 sot-r.1   102603131   uncharacterized LOC102603131 
 cit-r.1   102614241   uncharacterized LOC102614241 
 nta-r.1   107792705   uncharacterized LOC107792705 
 nta-r.1   107807960   uncharacterized LOC107807960 

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Top 50 coexpressed genes to 4334538 (osa-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4334538 (osa-r.6 coexpression data)

CoexMap"4334538"


osaLOC4334538 | Entrez gene ID : 4334538      
Species osa tae hvu bdi zma sbi gma sly vvi ppo mtr ghi sot cit nta cre bna bra ath
Paralog 4 3 1 1 1 1 1 1 1 1 1 1 1 1 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000077 [list] [network] DNA damage checkpoint signaling  (16 genes)  IEA  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (110 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (3003 genes)  IEA  
GO MF
GO:0042393 [list] [network] histone binding  (55 genes)  IEA  
Protein XP_015629055.1 [sequence] [blastp]
XP_015629057.1 [sequence] [blastp]
XP_066165023.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cysk_nucl 2,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_015629055.1)
nucl 4,  chlo 3,  cysk_nucl 2,  mito 1,  plas 1,  extr 1,  vacu 1,  mito_plas 1  (predict for XP_015629057.1)
nucl 3,  E.R. 2,  cysk_nucl 2,  chlo 1,  plas 1,  E.R._vacu 1  (predict for XP_066165023.1)
Subcellular
localization
TargetP
other 7  (predict for XP_015629055.1)
other 7  (predict for XP_015629057.1)
other 8  (predict for XP_066165023.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-r.6
for
4334538
osa-u.5
for
4334538
osa-m.8
for
4334538
osa-e.1
for
4334538
tae-r.2
for
123123407
tae-r.2
for
123113900
tae-r.2
for
123105591
hvu-r.1
for
123452936
bdi-r.1
for
100844410
zma-u.5
for
103644241
sbi-r.1
for
8057397
gma-u.5
for
100808072
sly-u.5
for
101260553
vvi-u.5
for
100245338
ppo-u.5
for
7460263
mtr-u.5
for
11413332
ghi-r.1
for
121207630
sot-r.1
for
102603131
cit-r.1
for
102614241
nta-r.1
for
107792705
nta-r.1
for
107807960


Ortholog ID: 12791
Species osa tae tae tae hvu bdi zma sbi gma sly vvi ppo mtr ghi sot cit nta nta
Symbol LOC4334538 LOC123123407 LOC123113900 LOC123105591 LOC123452936 LOC100844410 LOC103644241 LOC8057397 LOC100808072 LOC101260553 LOC100245338 LOC7460263 LOC11413332 LOC121207630 LOC102603131 LOC102614241 LOC107792705 LOC107807960
Function* uncharacterized LOC4334538 uncharacterized LOC123123407 uncharacterized LOC123113900 uncharacterized LOC123105591 uncharacterized LOC123452936 uncharacterized LOC100844410 BRCA1 C Terminus domain containing protein expressed uncharacterized LOC8057397 uncharacterized LOC100808072 uncharacterized LOC101260553 uncharacterized LOC100245338 uncharacterized LOC7460263 uncharacterized LOC11413332 uncharacterized LOC121207630 uncharacterized LOC102603131 uncharacterized LOC102614241 uncharacterized LOC107792705 uncharacterized LOC107807960
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 3
tae03082 ATP-dependent chromatin remodeling 3
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00061 Fatty acid biosynthesis 3
tae00071 Fatty acid degradation 3
tae01212 Fatty acid metabolism 3
tae04146 Peroxisome 3
tae03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03440 Homologous recombination 3
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 8
mtr03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 8
sot03460 Fanconi anemia pathway 4
sot03430 Mismatch repair 3
sot03440 Homologous recombination 3
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4334538 123123407 123113900 123105591 123452936 100844410 103644241 8057397 100808072 101260553 100245338 7460263 11413332 121207630 102603131 102614241 107792705 107807960
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