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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-r.6   4346008   protein CUP-SHAPED COTYLEDON 3 
 osa-u.5   4346008   protein CUP-SHAPED COTYLEDON 3 
 zma-u.5   606438   Protein CUP-SHAPED COTYLEDON 3 
 sbi-r.1   8064020   protein CUP-SHAPED COTYLEDON 3 
 ghi-r.1   107905749   protein CUP-SHAPED COTYLEDON 3 
 ghi-r.1   107921388   protein CUP-SHAPED COTYLEDON 3-like 
 ghi-r.1   107917103   protein CUP-SHAPED COTYLEDON 3 

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Top 50 coexpressed genes to 4346008 (osa-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4346008 (osa-r.6 coexpression data)

CoexMap"4346008"


osaLOC4346008 | Entrez gene ID : 4346008      
Species osa zma sbi ghi gma sot sly cit mtr bra tae ath bna hvu ppo vvi cre nta bdi
Paralog 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1615 genes)  IEA  
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (1843 genes)  IEA  
Protein XP_015648828.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl 2,  mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_015648828.1)
Subcellular
localization
TargetP
other 8,  scret 4  (predict for XP_015648828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-r.6
for
4346008
osa-u.5
for
4346008
zma-u.5
for
606438
sbi-r.1
for
8064020
ghi-r.1
for
107905749
ghi-r.1
for
107921388
ghi-r.1
for
107917103


Ortholog ID: 8773
Species osa zma sbi ghi ghi ghi
Symbol LOC4346008 LOC606438 LOC8064020 LOC107905749 LOC107917103 LOC107905712
Function* protein CUP-SHAPED COTYLEDON 3 Protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3 protein CUP-SHAPED COTYLEDON 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 4
sbi00280 Valine, leucine and isoleucine degradation 3
sbi00410 beta-Alanine metabolism 3
sbi00640 Propanoate metabolism 3
sbi01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4346008 606438 8064020 107905749 107917103 107905712
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