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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   107277437   arogenate dehydrogenase 2, chloroplastic 
 osa-r.6   107277437   arogenate dehydrogenase 2, chloroplastic 
 osa-e.1   107277437   arogenate dehydrogenase 2, chloroplastic 
 osa-u.5   4342026   arogenate dehydrogenase 2, chloroplastic 
 osa-u.5   4341232   arogenate dehydrogenase 2, chloroplastic 
 zma-u.5   100284089   arogenate dehydrogenase 
 zma-u.5   100281078   arogenate dehydrogenase 
 zma-u.5   100281038   arogenate dehydrogenase 
 ath-u.5   AT5G34930   arogenate dehydrogenase 
 ath-u.5   AT1G15710   prephenate dehydrogenase family protein 
 gma-u.5   PDH1   prephenate dehydrogenase 1 
 gma-u.5   ADH1   arogenate dehydrogenase 1, chloroplastic-like 
 gma-u.5   TYRA-A   arogenate dehydrogenase 2 
 sly-u.5   101259263   arogenate dehydrogenase 2, chloroplastic 
 sly-u.5   101259361   arogenate dehydrogenase 2, chloroplastic-like 
 sly-u.5   101264432   arogenate dehydrogenase 1, chloroplastic 
 vvi-u.5   104877397   arogenate dehydrogenase 2, chloroplastic 
 ppo-u.5   7472451   arogenate dehydrogenase 1, chloroplastic 
 ppo-u.5   18099902   arogenate dehydrogenase 1, chloroplastic 
 ppo-u.5   18094861   arogenate dehydrogenase 2, chloroplastic 
 mtr-u.5   11415867   arogenate dehydrogenase 1, chloroplastic 
 mtr-u.5   11423073   arogenate dehydrogenase 1, chloroplastic 
 mtr-u.5   11445490   arogenate dehydrogenase 1, chloroplastic 

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Top 50 coexpressed genes to 107277437 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107277437 (osa-u.5 coexpression data)

CoexMap"107277437"


osaLOC107277437 | Entrez gene ID : 107277437      
Species osa zma ath gma sly vvi ppo mtr cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 2 3 3 1 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG osa00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (52 genes)
osa01230 [list] [network] Biosynthesis of amino acids (235 genes)
GO BP
GO:0006571 [list] [network] L-tyrosine biosynthetic process  (3 genes)  IEA  
GO CC
GO MF
GO:0004665 [list] [network] prephenate dehydrogenase (NADP+) activity  (3 genes)  IEA  
GO:0008977 [list] [network] prephenate dehydrogenase (NAD+) activity  (3 genes)  IEA  
GO:0033730 [list] [network] arogenate dehydrogenase (NADP+) activity  (3 genes)  IEA  
Protein XP_015641140.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_015641140.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_015641140.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
107277437

.
osa-r.6
for
107277437

.
osa-e.1
for
107277437

.
osa-u.5
for
4342026

.
osa-u.5
for
4341232

.
zma-u.5
for
100284089

.
zma-u.5
for
100281078

.
zma-u.5
for
100281038

.
ath-u.5
for
AT5G34930

.
ath-u.5
for
AT1G15710

.
gma-u.5
for
PDH1

.
gma-u.5
for
ADH1

.
gma-u.5
for
TYRA-A

.
sly-u.5
for
101259263

.
sly-u.5
for
101259361

.
sly-u.5
for
101264432

.
vvi-u.5
for
104877397

.
ppo-u.5
for
7472451

.
ppo-u.5
for
18099902

.
ppo-u.5
for
18094861

.
mtr-u.5
for
11415867

.
mtr-u.5
for
11423073

.
mtr-u.5
for
11445490

.


Ortholog ID: 1881
Species ath ath gma gma sly sly osa osa zma zma bra bra ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G34930 AT1G15710 ADH1 TYRA-A LOC101264432 LOC101259361 LOC4342026 LOC107277437 LOC100276497 LOC100284089 LOC103842888 LOC103858107 LOC18094861 LOC7472451 LOC11415867 LOC11423073 LOC123163666 LOC123169064 LOC123408896 LOC123407447 LOC107906447 LOC107901339 LOC106414620 LOC111200313 CHLRE_06g278350v5 LOC8064968 LOC8064969 LOC102605098 LOC102587993 LOC102624096 LOC102607475 LOC100829970 LOC100828973 LOC107813162 LOC107764315
Function* arogenate dehydrogenase prephenate dehydrogenase family protein arogenate dehydrogenase 1, chloroplastic-like arogenate dehydrogenase 2 arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 2, chloroplastic uncharacterized LOC100276497 arogenate dehydrogenase arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic uncharacterized protein arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 1, chloroplastic-like arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 1, chloroplastic arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 2, chloroplastic-like arogenate dehydrogenase 2, chloroplastic arogenate dehydrogenase 1, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 3
ath00564 Glycerophospholipid metabolism 2
ath00710 Carbon fixation by Calvin cycle 2
ath01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00620 Pyruvate metabolism 8
gma01200 Carbon metabolism 8
gma01230 Biosynthesis of amino acids 6
gma00010 Glycolysis / Gluconeogenesis 6
gma00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 3
gma03082 ATP-dependent chromatin remodeling 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01230 Biosynthesis of amino acids 8
osa03050 Proteasome 6
osa00270 Cysteine and methionine metabolism 5
osa01200 Carbon metabolism 4
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 9
bra01200 Carbon metabolism 8
bra00710 Carbon fixation by Calvin cycle 7
bra00010 Glycolysis / Gluconeogenesis 4
bra00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03040 Spliceosome 3
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00920 Sulfur metabolism 2
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 13
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 9
sbi00940 Phenylpropanoid biosynthesis 3
sbi00670 One carbon pool by folate 3
sbi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01230 Biosynthesis of amino acids 7
sbi00670 One carbon pool by folate 3
sbi01240 Biosynthesis of cofactors 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sbi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00360 Phenylalanine metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 9
cit00620 Pyruvate metabolism 8
cit00010 Glycolysis / Gluconeogenesis 6
cit01240 Biosynthesis of cofactors 6
cit00020 Citrate cycle (TCA cycle) 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 3
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
nta01230 Biosynthesis of amino acids 7
nta00270 Cysteine and methionine metabolism 4
nta00670 One carbon pool by folate 4
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04146 Peroxisome 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 833436 838140 100801552 100803931 101264432 101259361 4342026 107277437 100276497 100284089 103842888 103858107 18094861 7472451 11415867 11423073 123163666 123169064 123408896 123407447 107906447 107901339 106414620 111200313 5720883 8064968 8064969 102605098 102587993 102624096 102607475 100829970 100828973 107813162 107764315
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