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Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4336423   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 osa-r.6   4336423   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 osa-m.8   4336423   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 osa-e.1   4336423   pentatricopeptide repeat-containing protein At3g22670, mitochondrial 
 zma-u.5   103653005   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 zma-u.5   100276413   uncharacterized LOC100276413 
 gma-u.5   100796114   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 vvi-u.5   109121403   pentatricopeptide repeat-containing protein At1g77360, mitochondrial 
 ppo-u.5   7478184   pentatricopeptide repeat-containing protein At1g71060, mitochondrial 

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Top 50 coexpressed genes to 4336423 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 4336423 (osa-u.5 coexpression data)

CoexMap"4336423"


osaLOC4336423 | Entrez gene ID : 4336423      
Species osa zma gma vvi ppo ath hvu sot tae cit sbi sly ghi cre bna nta bdi bra mtr
Paralog 4 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031930 [list] [network] mitochondria-nucleus signaling pathway  (13 genes)  IEA  
GO:0010019 [list] [network] chloroplast-nucleus signaling pathway  (14 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (655 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4590 genes)  IEA  
Protein XP_015636184.1 [sequence] [blastp]
XP_015636185.1 [sequence] [blastp]
XP_025880292.1 [sequence] [blastp]
XP_066166091.1 [sequence] [blastp]
XP_066166092.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_015636184.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_015636185.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_025880292.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_066166091.1)
nucl 4,  cyto 3,  chlo 2,  cysk_nucl 2,  nucl_plas 2  (predict for XP_066166092.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for XP_015636184.1)
other 8,  chlo 4  (predict for XP_015636185.1)
other 8,  chlo 4  (predict for XP_025880292.1)
other 8,  chlo 4  (predict for XP_066166091.1)
other 8,  chlo 4  (predict for XP_066166092.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4336423

.
osa-r.6
for
4336423

.
osa-m.8
for
4336423

.
osa-e.1
for
4336423

.
zma-u.5
for
103653005

.
zma-u.5
for
100276413

.
gma-u.5
for
100796114

.
vvi-u.5
for
109121403

.
ppo-u.5
for
7478184

.


Ortholog ID: 13245
Species gma osa zma zma vvi ppo tae tae hvu ghi ghi sbi cit bdi
Symbol LOC100796114 LOC4336423 LOC103653005 LOC100276413 LOC109121403 LOC7478184 LOC123189870 LOC123053975 LOC123427263 LOC107898743 LOC121202855 LOC8056017 LOC102614236 LOC100821875
Function* pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At3g22670, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial uncharacterized LOC100276413 pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g71060, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like pentatricopeptide repeat-containing protein At1g77360, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 5
gma00513 Various types of N-glycan biosynthesis 5
gma04141 Protein processing in endoplasmic reticulum 5
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
ghi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100796114 4336423 103653005 100276413 109121403 7478184 123189870 123053975 123427263 107898743 121202855 8056017 102614236 100821875
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