ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4337186	uncharacterized LOC4337186
osa-r.6	4337186	uncharacterized LOC4337186
osa-m.8	4337186	uncharacterized LOC4337186
osa-e.1	4337186	uncharacterized LOC4337186
tae-r.2	123190809	NEDD8 ultimate buster 1
tae-r.2	123054957	NEDD8 ultimate buster 1
tae-r.2	123047145	NEDD8 ultimate buster 1
hvu-r.1	123428174	NEDD8 ultimate buster 1
bdi-r.1	100829250	NEDD8 ultimate buster 1
zma-u.5	103645857	NEDD8 ultimate buster 1
sbi-r.1	8079566	NEDD8 ultimate buster 1
ath-u.5	NUB1	ubiquitin-associated (UBA)/TS-N domain-containing protein
gma-u.5	100804062	NEDD8 ultimate buster 1
gma-u.5	100792972	NEDD8 ultimate buster 1
sly-u.5	101255805	uncharacterized LOC101255805
bra-r.6	103860368	NEDD8 ultimate buster 1
vvi-u.5	100246604	uncharacterized LOC100246604
ppo-u.5	18099892	uncharacterized LOC18099892
ppo-u.5	112325836	uncharacterized LOC112325836
mtr-u.5	25488333	NEDD8 ultimate buster 1
ghi-r.1	107913058	NEDD8 ultimate buster 1
ghi-r.1	107906939	NEDD8 ultimate buster 1
bna-r.1	106389409	NEDD8 ultimate buster 1
bna-r.1	106439759	NEDD8 ultimate buster 1-like
sot-r.1	102584013	NEDD8 ultimate buster 1
cit-r.1	102608022	uncharacterized LOC102608022
nta-r.1	107832680	uncharacterized LOC107832680
nta-r.1	107759083	uncharacterized LOC107759083
cre-r.1	CHLRE_03g205650v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:2000058 [list] [network] regulation of ubiquitin-dependent protein catabolic process

(38 genes)

IEA

GO CC

GO MF

GO:0005515 [list] [network] protein binding

(4590 genes)

IEA

Protein

XP_015637180.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 1, nucl 1, mito 1, pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_015637180.1)

Subcellular
localization
TargetP

other 5

(predict for XP_015637180.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4337186	osa-r.6 for 4337186	osa-m.8 for 4337186	osa-e.1 for 4337186	tae-r.2 for 123190809	tae-r.2 for 123054957	tae-r.2 for 123047145	hvu-r.1 for 123428174	bdi-r.1 for 100829250	zma-u.5 for 103645857	sbi-r.1 for 8079566	ath-u.5 for NUB1	gma-u.5 for 100804062	gma-u.5 for 100792972	sly-u.5 for 101255805	bra-r.6 for 103860368	vvi-u.5 for 100246604	ppo-u.5 for 18099892	ppo-u.5 for 112325836	mtr-u.5 for 25488333	ghi-r.1 for 107913058	ghi-r.1 for 107906939	bna-r.1 for 106389409	bna-r.1 for 106439759	sot-r.1 for 102584013	cit-r.1 for 102608022	nta-r.1 for 107832680	nta-r.1 for 107759083	cre-r.1 for CHLRE_03g205650v5

Ortholog

Ortholog ID: 8869

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

NUB1

Function^*

uncharacterized LOC4337186

NEDD8 ultimate buster 1

ubiquitin-associated (UBA)/TS-N domain-containing protein

NEDD8 ultimate buster 1

uncharacterized LOC101255805

NEDD8 ultimate buster 1

uncharacterized LOC100246604

uncharacterized LOC18099892

uncharacterized LOC112325836

NEDD8 ultimate buster 1

NEDD8 ultimate buster 1-like

NEDD8 ultimate buster 1

uncharacterized LOC102608022

uncharacterized LOC107832680

uncharacterized LOC107759083

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00010	Glycolysis / Gluconeogenesis	3
osa01200	Carbon metabolism	2
osa01230	Biosynthesis of amino acids	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2
tae00071	Fatty acid degradation	2
tae00410	beta-Alanine metabolism	2
tae00592	alpha-Linolenic acid metabolism	2
tae00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	3
tae00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	3
bdi04130	SNARE interactions in vesicular transport	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00310	Lysine degradation	2
zma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	3
sbi00020	Citrate cycle (TCA cycle)	2
sbi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00480	Glutathione metabolism	2
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04136	Autophagy - other	2
bra00562	Inositol phosphate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04136	Autophagy - other	2

Expression

Expression pattern

Entrez Gene ID^*

4337186

123190809

123054957

123047145

123428174

100829250

103645857

8079566

815729

100804062

100792972

101255805

103860368

100246604

18099892

112325836

25488333

107913058

107906939

106389409

106439759

102584013

102608022

107832680

107759083

66053049

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4337186 (osa-u.5 coexpression data)

Top 50 enrichment test to 4337186 (osa-u.5 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	1	1	1	2	1	1	1	2	1	2	2	1	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4337186 (osa-u.5 coexpression data)

Top 50 enrichment test to 4337186 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**