ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
osa-u.5	4338041	protein NDL2
osa-r.6	4338041	protein NDL2
osa-m.8	4338041	protein NDL2
osa-e.1	4338041	protein NDL2
osa-u.5	4327306	protein NDL2
osa-u.5	4341312	protein NDL1
osa-u.5	4328772	protein NDL1
tae-r.2	101290587	protein NDL1
tae-r.2	123060369	protein NDL1
tae-r.2	123165957	protein NDL1
hvu-r.1	123407859	protein NDL1-like
hvu-r.1	123442897	protein NDL1-like
hvu-r.1	123404200	protein NDL1-like
bdi-r.1	100828191	protein NDL2
bdi-r.1	100838600	protein NDL1
bdi-r.1	100845470	protein NDL1
zma-u.5	103628577	protein NDL1
zma-u.5	100193284	uncharacterized LOC100193284
zma-u.5	100272647	pollen-specific protein SF21
sbi-r.1	8073786	pollen-specific protein SF21
sbi-r.1	8066607	pollen-specific protein SF21
sbi-r.1	8055714	pollen-specific protein SF21
ath-u.5	NDL3	N-MYC downregulated-like 3
ath-u.5	NDL2	N-MYC downregulated-like 2
ath-u.5	NDL1	N-MYC downregulated-like 1
gma-u.5	100804729	pollen-specific protein SF21-like
gma-u.5	100781823	protein NDL2
gma-u.5	100782850	protein NDL1
sly-u.5	101255415	protein NDL1-like
sly-u.5	101262545	protein NDL2
sly-u.5	101266512	protein NDL1-like
bra-r.6	103849015	protein NDL2-like
bra-r.6	103842632	protein NDL3
bra-r.6	103845105	protein NDL1
vvi-u.5	100252510	protein NDL2
vvi-u.5	100254362	protein NDL1
ppo-u.5	7463744	protein NDL2
ppo-u.5	7470709	protein NDL2
ppo-u.5	18107680	protein NDL1
mtr-u.5	11419160	protein NDL2
mtr-u.5	11426490	protein NDL1
ghi-r.1	107906997	protein NDL2
ghi-r.1	107895344	protein NDL1
ghi-r.1	107958888	protein NDL2
bna-r.1	106358518	protein NDL2
bna-r.1	106383660	protein NDL2
bna-r.1	106371478	protein NDL1
sot-r.1	102578674	pollen-specific protein SF21-like
sot-r.1	102592095	pollen-specific protein SF21-like
sot-r.1	102603886	pollen-specific protein SF21-like
cit-r.1	102621005	protein NDL1
cit-r.1	102608033	protein NDL2
nta-r.1	107830926	protein NDL1
nta-r.1	107827060	protein NDL2
nta-r.1	107795065	protein NDL1

Top 50 coexpressed genes to 4338041 (osa-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 4338041 (osa-u.5 coexpression data)

CoexMap"4338041"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_015639444.1 [sequence] [blastp]
XP_015639445.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, nucl 2, cysk_nucl 1, plas 1, cyto 1, mito 1, vacu 1, E.R. 1, golg_plas 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_015639444.1)
chlo 3, nucl 2, cysk_nucl 1, plas 1, cyto 1, mito 1, vacu 1, E.R. 1, golg_plas 1, E.R._vacu 1, cyto_E.R. 1	(predict for XP_015639445.1)

Subcellular
localization
TargetP

other 9	(predict for XP_015639444.1)
other 9	(predict for XP_015639445.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4338041	osa-r.6 for 4338041	osa-m.8 for 4338041	osa-e.1 for 4338041	osa-u.5 for 4327306	osa-u.5 for 4341312	osa-u.5 for 4328772	tae-r.2 for 101290587	tae-r.2 for 123060369	tae-r.2 for 123165957	hvu-r.1 for 123407859	hvu-r.1 for 123442897	hvu-r.1 for 123404200	bdi-r.1 for 100828191	bdi-r.1 for 100838600	bdi-r.1 for 100845470	zma-u.5 for 103628577	zma-u.5 for 100193284	zma-u.5 for 100272647	sbi-r.1 for 8073786	sbi-r.1 for 8066607	sbi-r.1 for 8055714	ath-u.5 for NDL3	ath-u.5 for NDL2	ath-u.5 for NDL1	gma-u.5 for 100804729	gma-u.5 for 100781823	gma-u.5 for 100782850	sly-u.5 for 101255415	sly-u.5 for 101262545	sly-u.5 for 101266512	bra-r.6 for 103849015	bra-r.6 for 103842632	bra-r.6 for 103845105	vvi-u.5 for 100252510	vvi-u.5 for 100254362	ppo-u.5 for 7463744	ppo-u.5 for 7470709	ppo-u.5 for 18107680	mtr-u.5 for 11419160	mtr-u.5 for 11426490	ghi-r.1 for 107906997	ghi-r.1 for 107895344	ghi-r.1 for 107958888	bna-r.1 for 106358518	bna-r.1 for 106383660	bna-r.1 for 106371478	sot-r.1 for 102578674	sot-r.1 for 102592095	sot-r.1 for 102603886	cit-r.1 for 102621005	cit-r.1 for 102608033	nta-r.1 for 107830926	nta-r.1 for 107827060	nta-r.1 for 107795065

Ortholog

Ortholog ID: 1481

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

NDL3

NDL2

NDL1

Function^*

protein NDL2

protein NDL1

protein NDL1-like

protein NDL2

protein NDL1

uncharacterized LOC100193284

pollen-specific protein SF21

N-MYC downregulated-like 3

N-MYC downregulated-like 2

N-MYC downregulated-like 1

pollen-specific protein SF21-like

protein NDL1

protein NDL2

protein NDL1-like

protein NDL2

protein NDL1-like

protein NDL2-like

protein NDL2

protein NDL1

protein NDL2

protein NDL1

protein NDL2

protein NDL1

protein NDL2

protein NDL1

pollen-specific protein SF21-like

protein NDL1

protein NDL2

protein NDL1

protein NDL1-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	2
hvu04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00564	Glycerophospholipid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00460	Cyanoamino acid metabolism	5
bna00500	Starch and sucrose metabolism	5
bna00999	Biosynthesis of various plant secondary metabolites	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00561	Glycerolipid metabolism	2
cit00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	4
nta00520	Amino sugar and nucleotide sugar metabolism	4
nta01240	Biosynthesis of cofactors	4
nta01250	Biosynthesis of nucleotide sugars	4
nta00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00053	Ascorbate and aldarate metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2
nta04075	Plant hormone signal transduction	2

Expression

Expression pattern

Entrez Gene ID^*

4338041

4341312

4328772

123165957

123160092

123144481

123407859

123442897

123404200

100828191

100838600

100845470

103628577

100193284

100272647

8073786

8066607

8061985

816481

831051

835777

100804729

100782850

100817684

101255415

101262545

101266512

103849015

103855932

100252510

100254362

7463744

7470709

18107680

11419160

11426490

107895344

107929863

121231940

106383660

106387459

106432804

102578674

102592095

102603886

102621005

102608033

107827060

107795065

107764796

The preparation time of this page was 0.2 [sec].


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	7	3	3	3	3	3	3	3	3	3	2	3	2	3	3	3	2	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4338041 (osa-u.5 coexpression data)

Top 50 enrichment test to 4338041 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**