ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4340586	uncharacterized LOC4340586
osa-r.6	4340586	uncharacterized LOC4340586
osa-m.8	4340586	uncharacterized LOC4340586
osa-e.1	4340586	uncharacterized LOC4340586
tae-r.2	123119929	DCN1-like protein 2
tae-r.2	123111003	DCN1-like protein 2
tae-r.2	123102797	DCN1-like protein 2
hvu-r.1	123452641	DCN1-like protein 2
bdi-r.1	100822780	DCN1-like protein 2
zma-u.5	100283814	DCN1-like protein 2
zma-u.5	100194017	Defective in cullin neddylation protein
sbi-r.1	8075721	DCN1-like protein 2
sbi-r.1	8057888	DCN1-like protein 2
ath-u.5	AT3G12760	defective in cullin neddylation protein
gma-u.5	100795410	DCN1-like protein 2
gma-u.5	100527072	DCN1-like protein 2
sly-u.5	101253207	uncharacterized LOC101253207
bra-r.6	103859464	DCN1-like protein 2
bra-r.6	103870227	DCN1-like protein 2
vvi-u.5	100245090	uncharacterized LOC100245090
ppo-u.5	7462151	uncharacterized LOC7462151
mtr-u.5	25486918	DCN1-like protein 2
ghi-r.1	107909152	DCN1-like protein 2
ghi-r.1	107928388	DCN1-like protein 2
bna-r.1	106397608	DCN1-like protein 2
bna-r.1	106389846	DCN1-like protein 2
sot-r.1	102603827	DCN1-like protein 1
sot-r.1	102606399	DCN1-like protein 2
cit-r.1	102630830	uncharacterized LOC102630830
nta-r.1	107790124	DCN1-like protein 1
nta-r.1	107804497	uncharacterized LOC107804497
nta-r.1	107814137	uncharacterized LOC107814137
cre-r.1	CHLRE_01g014751v5	uncharacterized protein
cre-r.1	CHLRE_12g487400v5	uncharacterized protein
cre-r.1	CHLRE_01g014850v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0045116 [list] [network] protein neddylation

(6 genes)

IEA

GO CC

GO:0000151 [list] [network] ubiquitin ligase complex

(154 genes)

IEA

GO MF

GO:0031624 [list] [network] ubiquitin conjugating enzyme binding	(35 genes)	IEA
GO:0097602 [list] [network] cullin family protein binding	(35 genes)	IEA
GO:0032182 [list] [network] ubiquitin-like protein binding	(64 genes)	IEA

Protein

XP_015644417.1 [sequence] [blastp]
XP_025882272.1 [sequence] [blastp]

Subcellular
localization
wolf

pero 3, nucl 2, mito 2, E.R. 1, cyto_nucl 1, nucl_plas 1, mito_plas 1	(predict for XP_015644417.1)
mito 4, nucl 2, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1	(predict for XP_025882272.1)

Subcellular
localization
TargetP

mito 7, other 5	(predict for XP_015644417.1)
mito 8, other 5	(predict for XP_025882272.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4340586	osa-r.6 for 4340586	osa-m.8 for 4340586	osa-e.1 for 4340586	tae-r.2 for 123119929	tae-r.2 for 123111003	tae-r.2 for 123102797	hvu-r.1 for 123452641	bdi-r.1 for 100822780	zma-u.5 for 100283814	zma-u.5 for 100194017	sbi-r.1 for 8075721	sbi-r.1 for 8057888	ath-u.5 for AT3G12760	gma-u.5 for 100795410	gma-u.5 for 100527072	sly-u.5 for 101253207	bra-r.6 for 103859464	bra-r.6 for 103870227	vvi-u.5 for 100245090	ppo-u.5 for 7462151	mtr-u.5 for 25486918	ghi-r.1 for 107909152	ghi-r.1 for 107928388	bna-r.1 for 106397608	bna-r.1 for 106389846	sot-r.1 for 102603827	sot-r.1 for 102606399	cit-r.1 for 102630830	nta-r.1 for 107790124	nta-r.1 for 107804497	nta-r.1 for 107814137	cre-r.1 for CHLRE_01g014751v5	cre-r.1 for CHLRE_12g487400v5	cre-r.1 for CHLRE_01g014850v5

Ortholog

Ortholog ID: 5105

Species

osa

tae

hvu

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

uncharacterized LOC4340586

DCN1-like protein 2

Defective in cullin neddylation protein

DCN1-like protein 2

defective in cullin neddylation protein

DCN1-like protein 2

uncharacterized LOC101253207

DCN1-like protein 2

uncharacterized LOC100245090

uncharacterized LOC7462151

DCN1-like protein 2

DCN1-like protein 1

DCN1-like protein 2

uncharacterized LOC102630830

DCN1-like protein 1

uncharacterized LOC107804497

DCN1-like protein 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	4
osa04141	Protein processing in endoplasmic reticulum	2
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00561	Glycerolipid metabolism	3
tae00564	Glycerophospholipid metabolism	3
tae04144	Endocytosis	3
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	3
tae04144	Endocytosis	2
tae03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	7
tae04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	3
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2
sbi00330	Arginine and proline metabolism	2
sbi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath04712	Circadian rhythm - plant	3
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	7
gma04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	2
ghi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03082	ATP-dependent chromatin remodeling	4
bna03083	Polycomb repressive complex	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03015	mRNA surveillance pathway	6
bna04136	Autophagy - other	6
bna04382	Cornified envelope formation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	2
nta04120	Ubiquitin mediated proteolysis	2
nta04141	Protein processing in endoplasmic reticulum	2
nta03020	RNA polymerase	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	12

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03050	Proteasome	12
cre04141	Protein processing in endoplasmic reticulum	3

Expression

Expression pattern

Entrez Gene ID^*

4340586

123119929

123111003

123102797

123452641

100822780

100283814

100194017

8075721

8057888

820458

100795410

100527072

101253207

103859464

103870227

100245090

7462151

25486918

107909152

107928388

106389846

106356790

102603827

102606399

102630830

107790124

107804497

107787528

66051995

66055406

5715095

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4340586 (osa-u.5 coexpression data)

Top 50 enrichment test to 4340586 (osa-u.5 coexpression data)


Species	osa	tae	hvu	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	4	3	1	1	2	2	1	2	1	2	1	1	1	2	2	2	1	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4340586 (osa-u.5 coexpression data)

Top 50 enrichment test to 4340586 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**