ATTED-II : GeneCoexpression result

Species	Gene	Description
osa-u.5	4351179	laccase-21-like
osa-r.6	4351179	laccase-21-like
bdi-r.1	100830116	putative laccase-9
bdi-r.1	100829501	putative laccase-9
bdi-r.1	100829199	laccase-21
zma-u.5	732839	laccase-like
zma-u.5	103627746	putative laccase-9
sbi-r.1	110435055	putative laccase-9
sbi-r.1	8075703	putative laccase-9
sbi-r.1	8071963	laccase-21
ath-u.5	TT10	Laccase/Diphenol oxidase family protein
gma-u.5	100814128	laccase-14
gma-u.5	100788301	laccase-15
sly-u.5	101261512	laccase-14-like
bra-r.6	TT10-2	laccase-15
bra-r.6	103854513	laccase-15
vvi-u.5	100259656	laccase-14
ppo-u.5	7492506	laccase-15
ppo-u.5	7494592	laccase-14
ghi-r.1	107914065	laccase-15
bna-r.1	106350787	laccase-15
bna-r.1	106399890	laccase-15-like
nta-r.1	107830713	laccase-14-like
nta-r.1	107759734	laccase-21-like

Annotation

functional annotation

KEGG

GO BP

GO:0046274 [list] [network] lignin catabolic process

(24 genes)

IEA

GO CC

GO:0048046 [list] [network] apoplast

(69 genes)

IEA

GO MF

GO:0052716 [list] [network] hydroquinone:oxygen oxidoreductase activity	(24 genes)	IEA
GO:0005507 [list] [network] copper ion binding	(68 genes)	IEA

Protein

NP_001410214.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 3, vacu 3, golg 1, nucl 1, mito 1, extr 1, E.R. 1, golg_plas 1

(predict for NP_001410214.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001410214.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	osa-u.5 for 4351179	osa-r.6 for 4351179	bdi-r.1 for 100830116	bdi-r.1 for 100829501	bdi-r.1 for 100829199	zma-u.5 for 732839	zma-u.5 for 103627746	sbi-r.1 for 110435055	sbi-r.1 for 8075703	sbi-r.1 for 8071963	ath-u.5 for TT10	gma-u.5 for 100814128	gma-u.5 for 100788301	sly-u.5 for 101261512	bra-r.6 for TT10-2	bra-r.6 for 103854513	vvi-u.5 for 100259656	ppo-u.5 for 7492506	ppo-u.5 for 7494592	ghi-r.1 for 107914065	bna-r.1 for 106350787	bna-r.1 for 106399890	nta-r.1 for 107830713	nta-r.1 for 107759734

Ortholog

Ortholog ID: 573

Species

osa

tae

bdi

zma

sbi

ath

gma

sly

bra

vvi

ppo

ghi

bna

Symbol

TT10

TT10-2

Function^*

laccase-21-like

putative laccase-9

laccase-21

laccase-like

putative laccase-9

laccase-21

Laccase/Diphenol oxidase family protein

laccase-14

laccase-15

laccase-14-like

laccase-15

laccase-14

laccase-15

laccase-15-like

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00904	Diterpenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00350	Tyrosine metabolism	2
zma00360	Phenylalanine metabolism	2
zma00380	Tryptophan metabolism	2
zma00901	Indole alkaloid biosynthesis	2
zma00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2
sbi00380	Tryptophan metabolism	2
sbi00901	Indole alkaloid biosynthesis	2
sbi00950	Isoquinoline alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	2
sbi00350	Tyrosine metabolism	2
sbi00360	Phenylalanine metabolism	2
sbi00380	Tryptophan metabolism	2
sbi00901	Indole alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	2
gma00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00904	Diterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00902	Monoterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
bna00940	Phenylpropanoid biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

4351179

123161361

100830116

100829501

100829199

732839

103627746

8075703

8071963

834862

100814128

100817468

101261512

103874927

103854513

100266761

100254477

18108483

18108485

18108487

107914065

106428988

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 4351179 (osa-u.5 coexpression data)

Top 50 enrichment test to 4351179 (osa-u.5 coexpression data)


Species	osa	bdi	zma	sbi	ath	gma	sly	bra	vvi	ppo	ghi	bna	nta	mtr	sot	cit	tae	hvu	cre
Paralog	2	3	2	3	1	2	1	2	1	2	1	2	2	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 4351179 (osa-u.5 coexpression data)

Top 50 enrichment test to 4351179 (osa-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**