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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7457670   pentatricopeptide repeat-containing protein At5g66520 
 ppo-u.5   7457670   pentatricopeptide repeat-containing protein At5g66520 
 ppo-r.4   7457670   pentatricopeptide repeat-containing protein At5g66520 
 vvi-u.5   104877641   pentatricopeptide repeat-containing protein At5g66520 
 sot-r.1   102594432   pentatricopeptide repeat-containing protein At5g66520 
 nta-r.1   107768057   pentatricopeptide repeat-containing protein At5g66520-like 
 nta-r.1   107769793   pentatricopeptide repeat-containing protein At5g66520-like 

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Top 50 coexpressed genes to 7457670 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7457670 (ppo-m.4 coexpression data)

CoexMap"7457670"


ppoLOC7457670 | Entrez gene ID : 7457670    
Species ppo vvi sot nta cre bra ath mtr hvu bna tae bdi osa gma zma cit sly ghi sbi
Paralog 3 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024455750.1 [sequence] [blastp]
XP_024455759.1 [sequence] [blastp]
XP_024455762.1 [sequence] [blastp]
XP_024455766.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 4  (predict for XP_024455750.1)
mito 6,  chlo 4  (predict for XP_024455759.1)
chlo 6,  mito 4  (predict for XP_024455762.1)
chlo 6,  mito 4  (predict for XP_024455766.1)
Subcellular
localization
TargetP
other 3  (predict for XP_024455750.1)
other 3  (predict for XP_024455759.1)
other 3  (predict for XP_024455762.1)
other 3  (predict for XP_024455766.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7457670
ppo-u.5
for
7457670
ppo-r.4
for
7457670
vvi-u.5
for
104877641
sot-r.1
for
102594432
nta-r.1
for
107768057
nta-r.1
for
107769793


Ortholog ID: 21956
Species ppo vvi sot nta nta
Symbol LOC7457670 LOC104877641 LOC102594432 LOC107768057 LOC107769793
Function* pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520 pentatricopeptide repeat-containing protein At5g66520-like pentatricopeptide repeat-containing protein At5g66520-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
sot01200 Carbon metabolism 3
sot00195 Photosynthesis 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7457670 104877641 102594432 107768057 107769793
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