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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7458630   50S ribosomal protein L10, chloroplastic 
 ppo-u.5   7458630   50S ribosomal protein L10, chloroplastic 
 ppo-r.4   7458630   50S ribosomal protein L10, chloroplastic 
 ppo-u.5   7457892   50S ribosomal protein L10, chloroplastic 
 gma-u.5   100791748   50S ribosomal protein L10, chloroplastic 
 gma-u.5   100795166   50S ribosomal protein L10, chloroplastic-like 
 mtr-u.5   11442695   50S ribosomal protein L10, chloroplastic 
 ath-u.5   AT3G12370   Ribosomal protein L10 family protein 
 ath-u.5   EMB3136   Ribosomal protein L10 family protein 
 bra-r.6   103846568   50S ribosomal protein L10, chloroplastic 
 bra-r.6   103870254   50S ribosomal protein L10, chloroplastic 
 bra-r.6   103850877   50S ribosomal protein L10, chloroplastic 
 vvi-u.5   100245108   large ribosomal subunit protein uL10c 
 ghi-r.1   107957336   50S ribosomal protein L10, chloroplastic 
 ghi-r.1   107904100   50S ribosomal protein L10, chloroplastic 
 bna-r.1   111204372   50S ribosomal protein L10, chloroplastic-like 
 bna-r.1   106452388   50S ribosomal protein L10, chloroplastic 
 bna-r.1   125593128   50S ribosomal protein L10, chloroplastic-like 
 cit-r.1   102628862   50S ribosomal protein L10, chloroplastic 
 sly-u.5   101256669   large ribosomal subunit protein uL10c 
 sot-r.1   102606013   50S ribosomal protein L10, chloroplastic 
 nta-r.1   107763454   50S ribosomal protein L10, chloroplastic 
 nta-r.1   107762422   large ribosomal subunit protein uL10c-like 
 osa-u.5   4332466   large ribosomal subunit protein uL10c 
 osa-u.5   4337653   large ribosomal subunit protein uL10c 
 zma-u.5   100285698   50S ribosomal protein L10, chloroplastic-like 
 zma-u.5   100274533   50S ribosomal protein L10 chloroplastic 
 tae-r.2   123085528   50S ribosomal protein L10, chloroplastic 
 tae-r.2   123092508   50S ribosomal protein L10, chloroplastic 
 tae-r.2   123097821   50S ribosomal protein L10, chloroplastic 
 hvu-r.1   123405708   50S ribosomal protein L10, chloroplastic-like 
 hvu-r.1   123448954   50S ribosomal protein L10, chloroplastic-like 
 sbi-r.1   8071244   50S ribosomal protein L10, chloroplastic 
 sbi-r.1   8084888   50S ribosomal protein L10, chloroplastic 
 bdi-r.1   100840045   50S ribosomal protein L10, chloroplastic 
 bdi-r.1   100829194   50S ribosomal protein L10, chloroplastic 
 cre-r.1   CHLRE_06g272850v5   uncharacterized protein 

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Top 50 coexpressed genes to 7458630 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7458630 (ppo-m.4 coexpression data)

CoexMap"7458630"


ppoLOC7458630 | Entrez gene ID : 7458630    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 3 1 2 3 1 1 1 2 2 2 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03010 [list] [network] Ribosome (698 genes)
GO BP
GO:0006412 [list] [network] translation  (598 genes)  IEA  
GO CC
GO:0015934 [list] [network] large ribosomal subunit  (216 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (439 genes)  IEA  
Protein XP_002316337.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3  (predict for XP_002316337.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002316337.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7458630
ppo-u.5
for
7458630
ppo-r.4
for
7458630
ppo-u.5
for
7457892
gma-u.5
for
100791748
gma-u.5
for
100795166
mtr-u.5
for
11442695
ath-u.5
for
AT3G12370
ath-u.5
for
EMB3136
bra-r.6
for
103846568
bra-r.6
for
103870254
bra-r.6
for
103850877
vvi-u.5
for
100245108
ghi-r.1
for
107957336
ghi-r.1
for
107904100
bna-r.1
for
111204372
bna-r.1
for
106452388
bna-r.1
for
125593128
cit-r.1
for
102628862
sly-u.5
for
101256669
sot-r.1
for
102606013
nta-r.1
for
107763454
nta-r.1
for
107762422
osa-u.5
for
4332466
osa-u.5
for
4337653
zma-u.5
for
100285698
zma-u.5
for
100274533
tae-r.2
for
123085528
tae-r.2
for
123092508
tae-r.2
for
123097821
hvu-r.1
for
123405708
hvu-r.1
for
123448954
sbi-r.1
for
8071244
sbi-r.1
for
8084888
bdi-r.1
for
100840045
bdi-r.1
for
100829194
cre-r.1
for
CHLRE_06g272850v5


Ortholog ID: 4074
Species ppo ppo gma gma mtr ath ath bra bra bra vvi ghi ghi bna bna bna cit sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC7458630 LOC7457892 LOC100791748 LOC100795166 LOC11442695 AT3G12370 EMB3136 LOC103846568 LOC103870254 LOC103850877 LOC100245108 LOC107957336 LOC107904100 LOC111204372 LOC125593128 LOC106436933 LOC102628862 LOC101256669 LOC102606013 LOC107763454 LOC107762422 LOC4332466 LOC4337653 LOC100285698 LOC100274533 LOC123092508 LOC123107379 LOC123116563 LOC123405708 LOC123448954 LOC8071244 LOC8084888 LOC100840045 LOC100829194 CHLRE_06g272850v5
Function* 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic Ribosomal protein L10 family protein Ribosomal protein L10 family protein 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic large ribosomal subunit protein uL10c 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic large ribosomal subunit protein uL10c 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic large ribosomal subunit protein uL10c-like large ribosomal subunit protein uL10c large ribosomal subunit protein uL10c 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10 chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic-like 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic 50S ribosomal protein L10, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo04626 Plant-pathogen interaction 2
ppo00195 Photosynthesis 2
ppo01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 15
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 11
nta00480 Glutathione metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
nta00480 Glutathione metabolism 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 8
tae00030 Pentose phosphate pathway 3
tae00230 Purine metabolism 3
tae01200 Carbon metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 12
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 10
sbi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 17
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7458630 7457892 100791748 100795166 11442695 820415 831195 103846568 103870254 103850877 100245108 107957336 107904100 111204372 125593128 106436933 102628862 101256669 102606013 107763454 107762422 4332466 4337653 100285698 100274533 123092508 123107379 123116563 123405708 123448954 8071244 8084888 100840045 100829194 5721804
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