ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-m.4	7458750	uncharacterized LOC7458750
ppo-u.5	7458750	uncharacterized LOC7458750
ppo-r.4	7458750	uncharacterized LOC7458750
gma-u.5	100796625	probable serine incorporator
gma-u.5	100788574	serinc domain-containing protein
mtr-u.5	11406553	probable serine incorporator
mtr-u.5	11437177	probable serine incorporator
mtr-u.5	25483058	probable serine incorporator
ath-u.5	AT3G24460	Serinc-domain containing serine and sphingolipid biosynthesis protein
ath-u.5	MEE55	Serinc-domain containing serine and sphingolipid biosynthesis protein
bra-r.6	103828635	probable serine incorporator
bra-r.6	103865252	probable serine incorporator
bra-r.6	103860036	probable serine incorporator
vvi-u.5	100254268	uncharacterized LOC100254268
ghi-r.1	107932956	probable serine incorporator
ghi-r.1	107942285	probable serine incorporator
ghi-r.1	107930796	probable serine incorporator
bna-r.1	125574966	probable serine incorporator
bna-r.1	106423586	probable serine incorporator
bna-r.1	111204576	probable serine incorporator
cit-r.1	102619205	uncharacterized LOC102619205
sly-u.5	101267270	uncharacterized LOC101267270
sot-r.1	102595536	probable serine incorporator
sot-r.1	102591401	probable serine incorporator
nta-r.1	107795883	uncharacterized LOC107795883
nta-r.1	107808581	uncharacterized LOC107808581
nta-r.1	107824941	uncharacterized LOC107824941
osa-u.5	4336342	uncharacterized LOC4336342
osa-u.5	4325348	uncharacterized LOC4325348
zma-u.5	100192587	uncharacterized LOC100192587
zma-u.5	100279792	uncharacterized LOC100279792
zma-u.5	100273927	Serinc-domain containing serine and sphingolipid biosynthesis protein
tae-r.2	123077525	probable serine incorporator
tae-r.2	123068996	probable serine incorporator
tae-r.2	123060453	probable serine incorporator
hvu-r.1	123427193	probable serine incorporator
hvu-r.1	123442974	probable serine incorporator
sbi-r.1	8078773	probable serine incorporator
bdi-r.1	100834284	probable serine incorporator
bdi-r.1	100826018	probable serine incorporator
cre-r.1	CHLRE_07g357750v5	uncharacterized protein

Top 50 coexpressed genes to 7458750 (ppo-m.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7458750 (ppo-m.4 coexpression data)

CoexMap"7458750"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3780 genes)

IEA

GO MF

Protein

XP_024446507.1 [sequence] [blastp]
XP_024446508.1 [sequence] [blastp]
XP_024446509.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 6, vacu 2, cyto 1, extr 1	(predict for XP_024446507.1)
plas 6, vacu 2, cyto 1, extr 1	(predict for XP_024446508.1)
plas 6, vacu 2, cyto 1, extr 1	(predict for XP_024446509.1)

Subcellular
localization
TargetP

other 9	(predict for XP_024446507.1)
other 9	(predict for XP_024446508.1)
other 9	(predict for XP_024446509.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7458750	ppo-u.5 for 7458750	ppo-r.4 for 7458750	gma-u.5 for 100796625	gma-u.5 for 100788574	mtr-u.5 for 11406553	mtr-u.5 for 11437177	mtr-u.5 for 25483058	ath-u.5 for AT3G24460	ath-u.5 for MEE55	bra-r.6 for 103828635	bra-r.6 for 103865252	bra-r.6 for 103860036	vvi-u.5 for 100254268	ghi-r.1 for 107932956	ghi-r.1 for 107942285	ghi-r.1 for 107930796	bna-r.1 for 125574966	bna-r.1 for 106423586	bna-r.1 for 111204576	cit-r.1 for 102619205	sly-u.5 for 101267270	sot-r.1 for 102595536	sot-r.1 for 102591401	nta-r.1 for 107795883	nta-r.1 for 107808581	nta-r.1 for 107824941	osa-u.5 for 4336342	osa-u.5 for 4325348	zma-u.5 for 100192587	zma-u.5 for 100279792	zma-u.5 for 100273927	tae-r.2 for 123077525	tae-r.2 for 123068996	tae-r.2 for 123060453	hvu-r.1 for 123427193	hvu-r.1 for 123442974	sbi-r.1 for 8078773	bdi-r.1 for 100834284	bdi-r.1 for 100826018	cre-r.1 for CHLRE_07g357750v5

Ortholog

Ortholog ID: 2319

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

MEE55

Function^*

uncharacterized LOC7458750

serinc domain-containing protein

probable serine incorporator

Serinc-domain containing serine and sphingolipid biosynthesis protein

probable serine incorporator

uncharacterized LOC100254268

probable serine incorporator

uncharacterized LOC102619205

uncharacterized LOC101267270

probable serine incorporator

uncharacterized LOC107808581

uncharacterized LOC107824941

uncharacterized LOC107779751

uncharacterized LOC4336342

uncharacterized LOC4325348

uncharacterized LOC100192587

uncharacterized LOC100279792

Serinc-domain containing serine and sphingolipid biosynthesis protein

probable serine incorporator

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	2
ppo04517	IgSF CAM signaling	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00190	Oxidative phosphorylation	2
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	2
mtr04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00053	Ascorbate and aldarate metabolism	2
bra01240	Biosynthesis of cofactors	2
bra03020	RNA polymerase	2
bra03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00561	Glycerolipid metabolism	3
vvi00564	Glycerophospholipid metabolism	3
vvi04070	Phosphatidylinositol signaling system	3
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00330	Arginine and proline metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03083	Polycomb repressive complex	2
sot04120	Ubiquitin mediated proteolysis	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00062	Fatty acid elongation	2
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	2
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	3
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
tae01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04814	Motor proteins	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	5

Expression

Expression pattern

Entrez Gene ID^*

7458750

100788574

100787982

11406553

11437177

25483058

822036

826965

103828635

103860036

103833355

100254268

107932956

107915073

107915902

125574966

106423586

102619205

101267270

102595536

102591401

107808581

107824941

107779751

4336342

4325348

100192587

100279792

100273927

123068996

123053848

123427193

123442974

8078773

100834284

100826018

5729203

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	2	3	1	3	3	1	1	2	3	2	3	3	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7458750 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7458750 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**