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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7462035   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ppo-u.5   7462035   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ppo-r.4   7462035   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 gma-u.5   100789335   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 gma-u.5   100808924   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ath-u.5   AT4G14190   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103844873   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 vvi-u.5   100253715   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ghi-r.1   107890511   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 ghi-r.1   121206054   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 bna-r.1   106365716   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 bna-r.1   106367625   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 
 cit-r.1   102620247   pentatricopeptide repeat-containing protein At4g14190, chloroplastic 

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Top 50 coexpressed genes to 7462035 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462035 (ppo-m.4 coexpression data)

CoexMap"7462035"


ppoLOC7462035 | Entrez gene ID : 7462035    
Species ppo gma ath bra vvi ghi bna cit cre nta hvu mtr tae bdi osa zma sly sot sbi
Paralog 3 2 1 1 1 2 2 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_024440215.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  pero 4,  chlo 2  (predict for XP_024440215.1)
Subcellular
localization
TargetP
mito 5  (predict for XP_024440215.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7462035
ppo-u.5
for
7462035
ppo-r.4
for
7462035
gma-u.5
for
100789335
gma-u.5
for
100808924
ath-u.5
for
AT4G14190
bra-r.6
for
103844873
vvi-u.5
for
100253715
ghi-r.1
for
107890511
ghi-r.1
for
121206054
bna-r.1
for
106365716
bna-r.1
for
106367625
cit-r.1
for
102620247


Ortholog ID: 14746
Species ppo gma gma ath bra vvi ghi ghi bna bna cit
Symbol LOC7462035 LOC100789335 LOC100808924 AT4G14190 LOC103844873 LOC100253715 LOC107890511 LOC121206054 LOC106365716 LOC106367625 LOC102620247
Function* pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic Pentatricopeptide repeat (PPR) superfamily protein pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic pentatricopeptide repeat-containing protein At4g14190, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00030 Pentose phosphate pathway 2
gma00230 Purine metabolism 2
gma01200 Carbon metabolism 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7462035 100789335 100808924 827059 103844873 100253715 107890511 121206054 106365716 106367625 102620247
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