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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7464763   probable rhamnogalacturonate lyase B 
 ppo-u.5   7464763   probable rhamnogalacturonate lyase B 
 ppo-r.4   7464763   probable rhamnogalacturonate lyase B 
 ppo-u.5   7476448   rhamnogalacturonate lyase B 
 ppo-u.5   7467220   probable rhamnogalacturonate lyase B 
 ppo-u.5   7467219   probable rhamnogalacturonate lyase B 
 gma-u.5   100815677   probable rhamnogalacturonate lyase B 
 gma-u.5   100814721   probable rhamnogalacturonate lyase B 
 gma-u.5   100814185   rhamnogalacturonate lyase 
 mtr-u.5   11426848   rhamnogalacturonate lyase 
 mtr-u.5   11435489   probable rhamnogalacturonate lyase B 
 mtr-u.5   11442502   rhamnogalacturonate lyase 
 ath-u.5   AT2G22620   Rhamnogalacturonate lyase family protein 
 bra-r.6   103837873   probable rhamnogalacturonate lyase B 
 bra-r.6   103864654   rhamnogalacturonate lyase 
 bra-r.6   103871768   probable rhamnogalacturonate lyase B 
 vvi-u.5   100247189   probable rhamnogalacturonate lyase B 
 ghi-r.1   107905134   probable rhamnogalacturonate lyase B 
 ghi-r.1   107957840   rhamnogalacturonate lyase 
 bna-r.1   106415698   probable rhamnogalacturonate lyase B 
 bna-r.1   106346233   probable rhamnogalacturonate lyase B 
 bna-r.1   106441989   rhamnogalacturonate lyase 
 cit-r.1   102607519   probable rhamnogalacturonate lyase B 
 cit-r.1   102606842   probable rhamnogalacturonate lyase B 
 cit-r.1   102608008   probable rhamnogalacturonate lyase B 
 sly-u.5   101261914   uncharacterized LOC101261914 
 sly-u.5   101260634   uncharacterized LOC101260634 
 sly-u.5   101267191   uncharacterized LOC101267191 
 sot-r.1   102588214   probable rhamnogalacturonate lyase B 
 nta-r.1   107822331   uncharacterized LOC107822331 
 nta-r.1   107815910   uncharacterized LOC107815910 
 nta-r.1   107806431   uncharacterized LOC107806431 
 osa-u.5   4346274   uncharacterized LOC4346274 
 osa-u.5   4346275   uncharacterized LOC4346275 
 osa-u.5   4349697   uncharacterized LOC4349697 
 zma-u.5   103643208   probable rhamnogalacturonate lyase B 
 zma-u.5   103654318   rhamnogalacturonate lyase B 
 zma-u.5   100286025   lyase 
 hvu-r.1   123407127   probable rhamnogalacturonate lyase B 
 bdi-r.1   100833182   probable rhamnogalacturonate lyase B 
 bdi-r.1   100846621   probable rhamnogalacturonate lyase B 

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Top 50 coexpressed genes to 7464763 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7464763 (ppo-m.4 coexpression data)

CoexMap"7464763"


ppoLOC7464763 | Entrez gene ID : 7464763    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma hvu bdi tae sbi cre
Paralog 6 3 3 1 3 1 2 3 3 3 1 3 3 3 1 2 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (863 genes)  IEA  
GO CC
GO MF
GO:0030246 [list] [network] carbohydrate binding  (251 genes)  IEA  
GO:0003824 [list] [network] catalytic activity  (9959 genes)  IEA  
Protein XP_002319997.3 [sequence] [blastp]
XP_024440649.1 [sequence] [blastp]
XP_024440650.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  nucl 1,  E.R. 1,  golg 1,  chlo 1,  cyto 1,  extr 1,  cysk_nucl 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1  (predict for XP_002319997.3)
vacu 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  golg 1,  cysk_nucl 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024440649.1)
vacu 4,  nucl 1,  E.R. 1,  chlo 1,  cyto 1,  extr 1,  golg 1,  cysk_nucl 1,  nucl_plas 1,  E.R._plas 1  (predict for XP_024440650.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_002319997.3)
scret 9  (predict for XP_024440649.1)
scret 9  (predict for XP_024440650.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7464763
ppo-u.5
for
7464763
ppo-r.4
for
7464763
ppo-u.5
for
7476448
ppo-u.5
for
7467220
ppo-u.5
for
7467219
gma-u.5
for
100815677
gma-u.5
for
100814721
gma-u.5
for
100814185
mtr-u.5
for
11426848
mtr-u.5
for
11435489
mtr-u.5
for
11442502
ath-u.5
for
AT2G22620
bra-r.6
for
103837873
bra-r.6
for
103864654
bra-r.6
for
103871768
vvi-u.5
for
100247189
ghi-r.1
for
107905134
ghi-r.1
for
107957840
bna-r.1
for
106415698
bna-r.1
for
106346233
bna-r.1
for
106441989
cit-r.1
for
102607519
cit-r.1
for
102606842
cit-r.1
for
102608008
sly-u.5
for
101261914
sly-u.5
for
101260634
sly-u.5
for
101267191
sot-r.1
for
102588214
nta-r.1
for
107822331
nta-r.1
for
107815910
nta-r.1
for
107806431
osa-u.5
for
4346274
osa-u.5
for
4346275
osa-u.5
for
4349697
zma-u.5
for
103643208
zma-u.5
for
103654318
zma-u.5
for
100286025
hvu-r.1
for
123407127
bdi-r.1
for
100833182
bdi-r.1
for
100846621


Ortholog ID: 639
Species ppo ppo ppo gma gma gma mtr mtr mtr ath bra bra bra vvi ghi ghi bna bna bna cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma hvu bdi bdi
Symbol LOC7464763 LOC7467217 LOC7491976 LOC100815677 LOC100814185 LOC100786488 LOC11426848 LOC11444270 LOC11422528 AT1G09910 LOC103864654 LOC103871768 LOC103871769 LOC100247189 LOC107905134 LOC107957840 LOC106415698 LOC106441989 LOC106391090 LOC102631222 LOC101261914 LOC101260634 LOC101250582 LOC102588214 LOC102595358 LOC102584605 LOC107814403 LOC107831685 LOC107816999 LOC4346274 LOC4346275 LOC4349697 LOC103643208 LOC103654318 LOC100286025 LOC123407127 LOC100833182 LOC100846621
Function* probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase probable rhamnogalacturonate lyase B Rhamnogalacturonate lyase family protein rhamnogalacturonate lyase probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B rhamnogalacturonate lyase probable rhamnogalacturonate lyase B rhamnogalacturonate lyase rhamnogalacturonate lyase-like rhamnogalacturonate lyase B uncharacterized LOC101261914 uncharacterized LOC101260634 uncharacterized LOC101250582 probable rhamnogalacturonate lyase B rhamnogalacturonate lyase-like probable rhamnogalacturonate lyase B uncharacterized LOC107814403 uncharacterized LOC107831685 uncharacterized LOC107816999 uncharacterized LOC4346274 uncharacterized LOC4346275 uncharacterized LOC4349697 probable rhamnogalacturonate lyase B rhamnogalacturonate lyase B lyase probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B probable rhamnogalacturonate lyase B
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo02010 ABC transporters 2
ppo04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 2
bra01212 Fatty acid metabolism 2
bra04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 7
bna03430 Mismatch repair 4
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00564 Glycerophospholipid metabolism 2
cit00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00061 Fatty acid biosynthesis 3
sot00071 Fatty acid degradation 3
sot01212 Fatty acid metabolism 3
sot04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00564 Glycerophospholipid metabolism 2
nta00565 Ether lipid metabolism 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma02010 ABC transporters 2
zma04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7464763 7467217 7491976 100815677 100814185 100786488 11426848 11444270 11422528 837523 103864654 103871768 103871769 100247189 107905134 107957840 106415698 106441989 106391090 102631222 101261914 101260634 101250582 102588214 102595358 102584605 107814403 107831685 107816999 4346274 4346275 4349697 103643208 103654318 100286025 123407127 100833182 100846621
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