ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-m.4	7468968	protein DETOXIFICATION 42
ppo-u.5	7468968	protein DETOXIFICATION 42
ppo-r.4	7468968	protein DETOXIFICATION 42
ppo-u.5	7467364	protein DETOXIFICATION 42
ppo-u.5	7488720	protein DETOXIFICATION 44, chloroplastic
ppo-u.5	7482281	protein DETOXIFICATION 43
gma-u.5	FRD3b	ferric reductase defective 3b
gma-u.5	FRD3a	ferric reductase defective 3a
gma-u.5	100805918	protein DETOXIFICATION 44, chloroplastic
mtr-u.5	11412157	protein DETOXIFICATION 44, chloroplastic
mtr-u.5	11421059	protein DETOXIFICATION 45, chloroplastic
mtr-u.5	11422671	protein DETOXIFICATION 42
ath-u.5	AT2G38330	MATE efflux family protein
ath-u.5	FRD3	MATE efflux family protein
ath-u.5	AT4G38380	MATE efflux family protein
bra-r.6	103832853	protein DETOXIFICATION 42
bra-r.6	103848885	protein DETOXIFICATION 43
vvi-u.5	100267546	protein DETOXIFICATION 45, chloroplastic
vvi-u.5	100258511	MATE efflux family protein-like
ghi-r.1	121203046	protein DETOXIFICATION 42
ghi-r.1	107918626	protein DETOXIFICATION 43
ghi-r.1	107906529	protein DETOXIFICATION 43
bna-r.1	111198031	protein DETOXIFICATION 42-like
bna-r.1	125580421	protein DETOXIFICATION 43-like
bna-r.1	125574806	protein DETOXIFICATION 42-like
cit-r.1	102624252	protein DETOXIFICATION 45, chloroplastic-like
cit-r.1	102630831	protein DETOXIFICATION 42-like
sly-u.5	101258125	protein DETOXIFICATION 45, chloroplastic-like
sly-u.5	101252931	protein DETOXIFICATION 45, chloroplastic
sly-u.5	101248929	protein DETOXIFICATION 44, chloroplastic
sot-r.1	102603217	protein DETOXIFICATION 44, chloroplastic
sot-r.1	102593991	protein DETOXIFICATION 42-like
sot-r.1	102592318	protein DETOXIFICATION 43-like
nta-r.1	107780510	protein DETOXIFICATION 45, chloroplastic
nta-r.1	107762577	protein DETOXIFICATION 44, chloroplastic
nta-r.1	107771007	protein DETOXIFICATION 45, chloroplastic-like
osa-u.5	4332069	protein DETOXIFICATION 42
osa-u.5	107277806	protein DETOXIFICATION 42
osa-u.5	107275911	protein DETOXIFICATION 42
zma-u.5	100501783	uncharacterized LOC100501783
zma-u.5	100383875	multidrug and toxic compound extrusion3
zma-u.5	103633151	protein DETOXIFICATION 45, chloroplastic
tae-r.2	123060391	protein DETOXIFICATION 42
tae-r.2	123085162	protein DETOXIFICATION 42
tae-r.2	123086322	protein DETOXIFICATION 44, chloroplastic
hvu-r.1	123449299	protein DETOXIFICATION 42-like
hvu-r.1	123444390	protein DETOXIFICATION 42-like
sbi-r.1	8055496	protein DETOXIFICATION 44, chloroplastic
sbi-r.1	110433897	protein DETOXIFICATION 45, chloroplastic-like
bdi-r.1	100842762	protein DETOXIFICATION 42
bdi-r.1	100840460	uncharacterized LOC100840460
cre-r.1	CHLRE_17g739650v5	uncharacterized protein
cre-r.1	CHLRE_08g369600v5	uncharacterized protein

Top 50 coexpressed genes to 7468968 (ppo-m.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7468968 (ppo-m.4 coexpression data)

CoexMap"7468968"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(1086 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3780 genes)

IEA

GO MF

GO:0042910 [list] [network] xenobiotic transmembrane transporter activity	(63 genes)	IEA
GO:0015297 [list] [network] antiporter activity	(202 genes)	IEA

Protein

XP_002322704.3 [sequence] [blastp]
XP_024442818.1 [sequence] [blastp]
XP_024442820.1 [sequence] [blastp]

Subcellular
localization
wolf

vacu 4, plas 3, cyto_plas 2, golg 1	(predict for XP_002322704.3)
vacu 4, plas 3, cyto_plas 2, golg 1	(predict for XP_024442818.1)
vacu 4, plas 3, cyto_plas 2, golg 1	(predict for XP_024442820.1)

Subcellular
localization
TargetP

other 6, mito 4	(predict for XP_002322704.3)
other 6, mito 4	(predict for XP_024442818.1)
other 6, mito 4	(predict for XP_024442820.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7468968	ppo-u.5 for 7468968	ppo-r.4 for 7468968	ppo-u.5 for 7467364	ppo-u.5 for 7488720	ppo-u.5 for 7482281	gma-u.5 for FRD3b	gma-u.5 for FRD3a	gma-u.5 for 100805918	mtr-u.5 for 11412157	mtr-u.5 for 11421059	mtr-u.5 for 11422671	ath-u.5 for AT2G38330	ath-u.5 for FRD3	ath-u.5 for AT4G38380	bra-r.6 for 103832853	bra-r.6 for 103848885	vvi-u.5 for 100267546	vvi-u.5 for 100258511	ghi-r.1 for 121203046	ghi-r.1 for 107918626	ghi-r.1 for 107906529	bna-r.1 for 111198031	bna-r.1 for 125580421	bna-r.1 for 125574806	cit-r.1 for 102624252	cit-r.1 for 102630831	sly-u.5 for 101258125	sly-u.5 for 101252931	sly-u.5 for 101248929	sot-r.1 for 102603217	sot-r.1 for 102593991	sot-r.1 for 102592318	nta-r.1 for 107780510	nta-r.1 for 107762577	nta-r.1 for 107771007	osa-u.5 for 4332069	osa-u.5 for 107277806	osa-u.5 for 107275911	zma-u.5 for 100501783	zma-u.5 for 100383875	zma-u.5 for 103633151	tae-r.2 for 123060391	tae-r.2 for 123085162	tae-r.2 for 123086322	hvu-r.1 for 123449299	hvu-r.1 for 123444390	sbi-r.1 for 8055496	sbi-r.1 for 110433897	bdi-r.1 for 100842762	bdi-r.1 for 100840460	cre-r.1 for CHLRE_17g739650v5	cre-r.1 for CHLRE_08g369600v5

Ortholog

Ortholog ID: 361

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

FRD3

Function^*

protein DETOXIFICATION 43