ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-m.4	7469646	uncharacterized LOC7469646
ppo-u.5	7469646	uncharacterized LOC7469646
ppo-r.4	7469646	uncharacterized LOC7469646
gma-u.5	100817972	thymocyte nuclear protein 1
mtr-u.5	11439393	thymocyte nuclear protein 1
ath-u.5	AT2G14660	thymocyte nuclear-like protein
bra-r.6	103828465	thymocyte nuclear protein 1
ghi-r.1	121225695	thymocyte nuclear protein 1
ghi-r.1	121212234	thymocyte nuclear protein 1
bna-r.1	106419848	thymocyte nuclear protein 1
bna-r.1	106374583	thymocyte nuclear protein 1
bna-r.1	125576687	thymocyte nuclear protein 1-like
sly-u.5	101261468	uncharacterized LOC101261468
sot-r.1	102590553	thymocyte nuclear protein 1
nta-r.1	107831082	uncharacterized LOC107831082
nta-r.1	107775932	uncharacterized LOC107775932
tae-r.2	123090645	thymocyte nuclear protein 1
hvu-r.1	123447060	thymocyte nuclear protein 1
sbi-r.1	8054181	thymocyte nuclear protein 1
bdi-r.1	100831181	thymocyte nuclear protein 1
cre-r.1	CHLRE_12g497650v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

Protein

XP_002313921.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 4, extr 3, nucl 2

(predict for XP_002313921.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002313921.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7469646	ppo-u.5 for 7469646	ppo-r.4 for 7469646	gma-u.5 for 100817972	mtr-u.5 for 11439393	ath-u.5 for AT2G14660	bra-r.6 for 103828465	ghi-r.1 for 121225695	ghi-r.1 for 121212234	bna-r.1 for 106419848	bna-r.1 for 106374583	bna-r.1 for 125576687	sly-u.5 for 101261468	sot-r.1 for 102590553	nta-r.1 for 107831082	nta-r.1 for 107775932	tae-r.2 for 123090645	hvu-r.1 for 123447060	sbi-r.1 for 8054181	bdi-r.1 for 100831181	cre-r.1 for CHLRE_12g497650v5

Ortholog

Ortholog ID: 9980

Species

ppo

gma

mtr

ath

bra

ghi

bna

sly

sot

nta

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7469646

thymocyte nuclear protein 1

thymocyte nuclear-like protein

thymocyte nuclear protein 1

uncharacterized LOC101261468

thymocyte nuclear protein 1

uncharacterized LOC107831082

uncharacterized LOC107775932

thymocyte nuclear protein 1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	8
ppo00240	Pyrimidine metabolism	4
ppo01232	Nucleotide metabolism	4
ppo00230	Purine metabolism	3
ppo00480	Glutathione metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	5
ghi03420	Nucleotide excision repair	5
ghi03430	Mismatch repair	5
ghi03410	Base excision repair	4
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	5
ghi03420	Nucleotide excision repair	5
ghi03430	Mismatch repair	5
ghi03410	Base excision repair	4
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03030	DNA replication	3
sly00240	Pyrimidine metabolism	2
sly01232	Nucleotide metabolism	2
sly03420	Nucleotide excision repair	2
sly03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	4
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	6
nta00230	Purine metabolism	4
nta00240	Pyrimidine metabolism	4
nta00480	Glutathione metabolism	4
nta01232	Nucleotide metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	8
nta01232	Nucleotide metabolism	8
nta00230	Purine metabolism	6
nta00480	Glutathione metabolism	6
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	3
sbi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03050	Proteasome	2
bdi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03030	DNA replication	3
cre04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

7469646

100817972

11439393

815954

103828465

121225695

121212234

106419848

106374583

106370366

101261468

102590553

107831082

107775932

123090645

123447060

8054181

100831181

5727898

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7469646 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7469646 (ppo-m.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	ghi	bna	sly	sot	nta	tae	hvu	sbi	bdi	cre	zma	vvi	osa	cit
Paralog	3	1	1	1	1	2	3	1	1	2	1	1	1	1	1	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7469646 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7469646 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**