ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-m.4	7472129	uncharacterized LOC7472129
ppo-u.5	7472129	uncharacterized LOC7472129
ppo-r.4	7472129	uncharacterized LOC7472129
ppo-u.5	7470391	uncharacterized LOC7470391
gma-u.5	100810591	CTL-like protein DDB_G0274487
gma-u.5	100801313	choline transporter-like protein 5
mtr-u.5	25492780	CTL-like protein DDB_G0274487
ath-u.5	AT4G38640	Plasma-membrane choline transporter family protein
bra-r.6	103835172	CTL-like protein DDB_G0288717
vvi-u.5	100250440	uncharacterized LOC100250440
ghi-r.1	107916745	CTL-like protein DDB_G0288717
ghi-r.1	107922242	CTL-like protein DDB_G0288717
bna-r.1	106389908	CTL-like protein DDB_G0288717
bna-r.1	106361537	CTL-like protein DDB_G0288717
bna-r.1	106357686	CTL-like protein DDB_G0288717
cit-r.1	102612505	uncharacterized LOC102612505
sly-u.5	104644279	uncharacterized LOC104644279
sot-r.1	102592847	CTL-like protein DDB_G0288717
nta-r.1	107781108	uncharacterized LOC107781108
nta-r.1	107815512	uncharacterized LOC107815512
cre-r.1	CHLRE_06g278550v5	uncharacterized protein
cre-r.1	CHLRE_09g390467v5	uncharacterized protein
cre-r.1	CHLRE_14g617800v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0055085 [list] [network] transmembrane transport

(1086 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(3780 genes)

IEA

GO MF

GO:0022857 [list] [network] transmembrane transporter activity

(1360 genes)

IEA

Protein

XP_002313719.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, E.R. 3, cyto_nucl 3, nucl 1, plas 1, E.R._vacu 1

(predict for XP_002313719.1)

Subcellular
localization
TargetP

other 9

(predict for XP_002313719.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7472129	ppo-u.5 for 7472129	ppo-r.4 for 7472129	ppo-u.5 for 7470391	gma-u.5 for 100810591	gma-u.5 for 100801313	mtr-u.5 for 25492780	ath-u.5 for AT4G38640	bra-r.6 for 103835172	vvi-u.5 for 100250440	ghi-r.1 for 107916745	ghi-r.1 for 107922242	bna-r.1 for 106389908	bna-r.1 for 106361537	bna-r.1 for 106357686	cit-r.1 for 102612505	sly-u.5 for 104644279	sot-r.1 for 102592847	nta-r.1 for 107781108	nta-r.1 for 107815512	cre-r.1 for CHLRE_06g278550v5	cre-r.1 for CHLRE_09g390467v5	cre-r.1 for CHLRE_14g617800v5

Ortholog

Ortholog ID: 11723

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

cre

Symbol

Function^*

uncharacterized LOC7472129

uncharacterized LOC7470391

CTL-like protein DDB_G0274487

choline transporter-like protein 5

CTL-like protein DDB_G0274487

Plasma-membrane choline transporter family protein

CTL-like protein DDB_G0288717

uncharacterized LOC100250440

CTL-like protein DDB_G0288717

uncharacterized LOC102612505

uncharacterized LOC104644279

CTL-like protein DDB_G0288717

uncharacterized LOC107781108

uncharacterized LOC107815512

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04144	Endocytosis	2
ppo04626	Plant-pathogen interaction	2
ppo00062	Fatty acid elongation	2
ppo03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04130	SNARE interactions in vesicular transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	4
mtr03018	RNA degradation	2
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	4
ath00190	Oxidative phosphorylation	3
ath04145	Phagosome	3
ath04142	Lysosome	2
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04146	Peroxisome	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	4
sly04145	Phagosome	4
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00230	Purine metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	8
cre03272	Virion - Hepatitis viruses	4
cre03250	Viral life cycle - HIV-1	3

Expression

Expression pattern

Entrez Gene ID^*

7472129

7470391

100810591

100801313

25492780

830020

103835172

100250440

107916745

107922242

106389908

106357686

125577113

102612505

104644279

102592847

107781108

107815512

5720887

5720636

5715843

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7472129 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7472129 (ppo-m.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	cre	sbi	tae	zma	osa	bdi	hvu
Paralog	4	2	1	1	1	1	2	3	1	1	1	2	3	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7472129 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7472129 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**