ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-m.4	7477138	uncharacterized LOC7477138
ppo-u.5	7477138	uncharacterized LOC7477138
ppo-r.4	7477138	uncharacterized LOC7477138
ppo-u.5	7457143	uncharacterized LOC7457143
gma-u.5	100811665	uncharacterized LOC100811665
gma-u.5	100800361	uncharacterized LOC100800361
mtr-u.5	11432180	uncharacterized LOC11432180
ath-u.5	AT4G39420	spatacsin carboxy-terminus protein
bra-r.6	103847160	uncharacterized LOC103847160
vvi-u.5	100247348	uncharacterized LOC100247348
ghi-r.1	107945506	uncharacterized LOC107945506
ghi-r.1	107925366	uncharacterized LOC107925366
bna-r.1	106439025	uncharacterized LOC106439025
bna-r.1	106352043	uncharacterized LOC106352043
cit-r.1	102626916	uncharacterized LOC102626916
sly-u.5	101246131	uncharacterized LOC101246131
sot-r.1	102605407	uncharacterized LOC102605407
nta-r.1	107760795	uncharacterized LOC107760795
nta-r.1	107825144	uncharacterized LOC107825144
nta-r.1	142166262	uncharacterized LOC142166262
osa-u.5	4325331	uncharacterized LOC4325331
zma-u.5	103644246	uncharacterized LOC103644246
tae-r.2	123060434	uncharacterized LOC123060434
tae-r.2	123068972	uncharacterized LOC123068972
tae-r.2	123077503	uncharacterized LOC123077503
hvu-r.1	123442956	uncharacterized LOC123442956
sbi-r.1	8057057	uncharacterized LOC8057057
bdi-r.1	100829381	uncharacterized LOC100829381

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005737 [list] [network] cytoplasm

(6111 genes)

IEA

GO MF

Protein

XP_024457922.2 [sequence] [blastp]
XP_024457923.2 [sequence] [blastp]
XP_024457924.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, nucl 3, E.R._plas 3, mito_plas 3	(predict for XP_024457922.2)
plas 5, nucl 3, E.R._plas 3, mito_plas 3	(predict for XP_024457923.2)
plas 5, nucl 3, E.R._plas 3, mito_plas 3	(predict for XP_024457924.2)

Subcellular
localization
TargetP

other 9	(predict for XP_024457922.2)
other 9	(predict for XP_024457923.2)
other 9	(predict for XP_024457924.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7477138	ppo-u.5 for 7477138	ppo-r.4 for 7477138	ppo-u.5 for 7457143	gma-u.5 for 100811665	gma-u.5 for 100800361	mtr-u.5 for 11432180	ath-u.5 for AT4G39420	bra-r.6 for 103847160	vvi-u.5 for 100247348	ghi-r.1 for 107945506	ghi-r.1 for 107925366	bna-r.1 for 106439025	bna-r.1 for 106352043	cit-r.1 for 102626916	sly-u.5 for 101246131	sot-r.1 for 102605407	nta-r.1 for 107760795	nta-r.1 for 107825144	nta-r.1 for 142166262	osa-u.5 for 4325331	zma-u.5 for 103644246	tae-r.2 for 123060434	tae-r.2 for 123068972	tae-r.2 for 123077503	hvu-r.1 for 123442956	sbi-r.1 for 8057057	bdi-r.1 for 100829381

Ortholog

Ortholog ID: 9632

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7477138

uncharacterized LOC7457143

uncharacterized LOC100811665

uncharacterized LOC100800361

uncharacterized LOC11432180

spatacsin carboxy-terminus protein

uncharacterized LOC103847160

uncharacterized LOC100247348

uncharacterized LOC107945506

uncharacterized LOC107925366

uncharacterized LOC106439025

uncharacterized LOC106352043

uncharacterized LOC102626916

uncharacterized LOC101246131

uncharacterized LOC102605407

uncharacterized LOC107760795

uncharacterized LOC107825144

uncharacterized LOC142166262

uncharacterized LOC4325331

uncharacterized LOC103644246

uncharacterized LOC123060434

uncharacterized LOC123068972

uncharacterized LOC123077503

uncharacterized LOC123442956

uncharacterized LOC8057057

uncharacterized LOC100829381

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04120	Ubiquitin mediated proteolysis	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04120	Ubiquitin mediated proteolysis	2
bra03082	ATP-dependent chromatin remodeling	2
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi03082	ATP-dependent chromatin remodeling	2
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi03082	ATP-dependent chromatin remodeling	3
ghi04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	4
bna04070	Phosphatidylinositol signaling system	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	3
bna04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04120	Ubiquitin mediated proteolysis	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03082	ATP-dependent chromatin remodeling	2
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04120	Ubiquitin mediated proteolysis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2
bdi03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

7477138

7457143

100811665

100800361

11432180

830097

103847160

100247348

107945506

107925366

106439025

106352043

102626916

101246131

102605407

107760795

107825144

142166262

4325331

103644246

123060434

123068972

123077503

123442956

8057057

100829381

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7477138 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7477138 (ppo-m.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	1	1	1	2	2	1	1	1	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7477138 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7477138 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**