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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7479995   PRA1 family protein F2 
 ppo-u.5   7479995   PRA1 family protein F2 
 ppo-r.4   7479995   PRA1 family protein F2 
 ppo-u.5   7476888   PRA1 family protein F2 
 ppo-u.5   18098981   PRA1 family protein E 
 gma-u.5   100816074   PRA1 family protein F3 
 gma-u.5   100815700   PRA1 family protein F4 
 gma-u.5   100809527   PRA1 family protein E 
 mtr-u.5   25484631   PRA1 family protein E 
 mtr-u.5   25484342   PRA1 family protein F2 
 mtr-u.5   25488577   PRA1 family protein D-like 
 ath-u.5   PRA1.E   prenylated RAB acceptor 1.E 
 bra-r.6   103871618   PRA1 family protein E 
 vvi-u.5   100259556   PRA1 family protein E 
 vvi-u.5   100248504   PRA1 family protein E 
 ghi-r.1   107955460   PRA1 family protein E 
 ghi-r.1   107936742   PRA1 family protein E 
 ghi-r.1   107926837   PRA1 family protein F2 
 bna-r.1   106400980   PRA1 family protein E-like 
 bna-r.1   106346309   PRA1 family protein E-like 
 cit-r.1   102609333   PRA1 family protein E 
 cit-r.1   102627761   PRA1 family protein E-like 
 sly-u.5   101259082   PRA1 family protein F3 
 sot-r.1   102580733   PRA1 family protein F2 
 sot-r.1   102585165   PRA1 family protein F3-like 
 nta-r.1   107780542   PRA1 family protein F3-like 
 nta-r.1   107766310   PRA1 family protein E-like 
 osa-u.5   4334436   PRA1 family protein E 
 zma-u.5   100280819   prenylated Rab receptor 2 
 zma-u.5   100280799   prenylated Rab receptor 2 
 tae-r.2   123108058   PRA1 family protein E 
 tae-r.2   123117227   PRA1 family protein E 
 tae-r.2   123125778   PRA1 family protein E 
 hvu-r.1   123452739   PRA1 family protein E-like 
 sbi-r.1   8081250   PRA1 family protein E 
 bdi-r.1   100843388   PRA1 family protein E 

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Top 50 coexpressed genes to 7479995 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7479995 (ppo-m.4 coexpression data)

CoexMap"7479995"


ppoLOC7479995 | Entrez gene ID : 7479995    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 3 1 1 2 3 2 2 1 2 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (540 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (593 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (618 genes)  IEA  
GO MF
Protein XP_002300800.1 [sequence] [blastp]
XP_024451300.1 [sequence] [blastp]
XP_024451301.1 [sequence] [blastp]
XP_024451302.1 [sequence] [blastp]
XP_024451303.1 [sequence] [blastp]
XP_052306583.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_002300800.1)
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024451300.1)
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024451301.1)
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024451302.1)
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_024451303.1)
plas 4,  chlo 2,  golg 2,  nucl_plas 2,  cysk_plas 2,  mito_plas 2,  cyto_plas 2  (predict for XP_052306583.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_002300800.1)
chlo 8  (predict for XP_024451300.1)
chlo 8  (predict for XP_024451301.1)
chlo 8  (predict for XP_024451302.1)
chlo 8  (predict for XP_024451303.1)
chlo 8  (predict for XP_052306583.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7479995
ppo-u.5
for
7479995
ppo-r.4
for
7479995
ppo-u.5
for
7476888
ppo-u.5
for
18098981
gma-u.5
for
100816074
gma-u.5
for
100815700
gma-u.5
for
100809527
mtr-u.5
for
25484631
mtr-u.5
for
25484342
mtr-u.5
for
25488577
ath-u.5
for
PRA1.E
bra-r.6
for
103871618
vvi-u.5
for
100259556
vvi-u.5
for
100248504
ghi-r.1
for
107955460
ghi-r.1
for
107936742
ghi-r.1
for
107926837
bna-r.1
for
106400980
bna-r.1
for
106346309
cit-r.1
for
102609333
cit-r.1
for
102627761
sly-u.5
for
101259082
sot-r.1
for
102580733
sot-r.1
for
102585165
nta-r.1
for
107780542
nta-r.1
for
107766310
osa-u.5
for
4334436
zma-u.5
for
100280819
zma-u.5
for
100280799
tae-r.2
for
123108058
tae-r.2
for
123117227
tae-r.2
for
123125778
hvu-r.1
for
123452739
sbi-r.1
for
8081250
bdi-r.1
for
100843388


Ortholog ID: 4146
Species ppo ppo gma gma mtr mtr mtr ath bra vvi vvi ghi ghi ghi bna bna cit cit sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC7476888 LOC18098981 LOC100809527 LOC100777017 LOC25484631 LOC25484342 LOC25499206 PRA1.E LOC103871618 LOC100259556 LOC100248504 LOC107955460 LOC107926837 LOC107923231 LOC106400980 LOC106346309 LOC102609333 LOC102627761 LOC101259082 LOC102580733 LOC102585165 LOC107766310 LOC142176413 LOC4334436 LOC100280819 LOC100280799 LOC123108058 LOC123117227 LOC123125778 LOC123452739 LOC8081250 LOC100843388
Function* PRA1 family protein F2 PRA1 family protein E PRA1 family protein E PRA1 family protein F3 PRA1 family protein E PRA1 family protein F2 PRA1 family protein F2 prenylated RAB acceptor 1.E PRA1 family protein E PRA1 family protein E PRA1 family protein E PRA1 family protein E PRA1 family protein F2 PRA1 family protein E PRA1 family protein E-like PRA1 family protein E-like PRA1 family protein E PRA1 family protein E-like PRA1 family protein F3 PRA1 family protein F2 PRA1 family protein F3-like PRA1 family protein E-like PRA1 family protein F3-like PRA1 family protein E prenylated Rab receptor 2 prenylated Rab receptor 2 PRA1 family protein E PRA1 family protein E PRA1 family protein E PRA1 family protein E-like PRA1 family protein E PRA1 family protein E
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
ath04142 Lysosome 4
ath04145 Phagosome 4
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04142 Lysosome 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 4
vvi04145 Phagosome 3
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 6
ghi03420 Nucleotide excision repair 6
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 5
bna00541 Biosynthesis of various nucleotide sugars 5
bna01250 Biosynthesis of nucleotide sugars 5
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03083 Polycomb repressive complex 4
sot04120 Ubiquitin mediated proteolysis 4
sot00190 Oxidative phosphorylation 2
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04016 MAPK signaling pathway - plant 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7476888 18098981 100809527 100777017 25484631 25484342 25499206 837399 103871618 100259556 100248504 107955460 107926837 107923231 106400980 106346309 102609333 102627761 101259082 102580733 102585165 107766310 142176413 4334436 100280819 100280799 123108058 123117227 123125778 123452739 8081250 100843388
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