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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7488137   methyl-CpG-binding domain-containing protein 7 
 ppo-u.5   7488137   methyl-CpG-binding domain-containing protein 7 
 ppo-r.4   7488137   methyl-CpG-binding domain-containing protein 7 
 ppo-u.5   7485704   methyl-CpG-binding domain-containing protein 5 
 ppo-u.5   7488117   methyl-CpG-binding domain-containing protein 5 
 gma-u.5   100795916   methyl-CpG-binding domain-containing protein 7 
 gma-u.5   100779601   methyl-CpG-binding domain-containing protein 7-like 
 mtr-u.5   25491275   methyl-CpG-binding domain-containing protein 7 
 mtr-u.5   11412807   methyl-CpG-binding domain-containing protein 7 
 ath-u.5   MBD5   methyl-CPG-binding domain protein 5 
 ath-u.5   MBD6   methyl-CPG-binding domain 6 
 ath-u.5   MBD7   methyl-CPG-binding domain 7 
 bra-r.6   103846163   methyl-CpG-binding domain-containing protein 6 
 bra-r.6   103851580   methyl-CpG-binding domain-containing protein 6 
 vvi-u.5   100853337   methyl-CpG-binding domain-containing protein 5 
 vvi-u.5   100255377   methyl-CpG-binding domain-containing protein 7 
 ghi-r.1   107906554   methyl-CpG-binding domain-containing protein 5 
 ghi-r.1   107933455   methyl-CpG-binding domain-containing protein 5 
 ghi-r.1   107943631   methyl-CpG-binding domain-containing protein 5 
 bna-r.1   106417393   methyl-CpG-binding domain-containing protein 6-like 
 bna-r.1   106417396   methyl-CpG-binding domain-containing protein 6-like 
 cit-r.1   102623206   methyl-CpG-binding domain-containing protein 7 
 cit-r.1   102618715   uncharacterized LOC102618715 
 sly-u.5   MBD5   methyl-CpG-binding domain-containing protein 5 
 sly-u.5   101267579   methyl-CpG-binding domain-containing protein 7 
 sot-r.1   102579273   uncharacterized LOC102579273 
 sot-r.1   102585353   methyl-CpG-binding domain-containing protein 7 
 sot-r.1   102595289   methyl-CpG-binding domain-containing protein 5-like 
 nta-r.1   107832011   methyl-CpG-binding domain-containing protein 5-like 
 nta-r.1   107804382   methyl-CpG-binding domain-containing protein 5 
 nta-r.1   107785555   methyl-CpG-binding domain-containing protein 7 

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Top 50 coexpressed genes to 7488137 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7488137 (ppo-m.4 coexpression data)

CoexMap"7488137"


ppoLOC7488137 | Entrez gene ID : 7488137    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta bdi osa tae zma cre sbi hvu
Paralog 5 2 2 3 2 2 3 2 2 2 3 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_024464195.1 [sequence] [blastp]
XP_024464196.1 [sequence] [blastp]
XP_052311620.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_024464195.1)
nucl 9  (predict for XP_024464196.1)
nucl 10  (predict for XP_052311620.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_024464195.1)
other 7,  chlo 4  (predict for XP_024464196.1)
other 7,  chlo 4  (predict for XP_052311620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7488137
ppo-u.5
for
7488137
ppo-r.4
for
7488137
ppo-u.5
for
7485704
ppo-u.5
for
7488117
gma-u.5
for
100795916
gma-u.5
for
100779601
mtr-u.5
for
25491275
mtr-u.5
for
11412807
ath-u.5
for
MBD5
ath-u.5
for
MBD6
ath-u.5
for
MBD7
bra-r.6
for
103846163
bra-r.6
for
103851580
vvi-u.5
for
100853337
vvi-u.5
for
100255377
ghi-r.1
for
107906554
ghi-r.1
for
107933455
ghi-r.1
for
107943631
bna-r.1
for
106417393
bna-r.1
for
106417396
cit-r.1
for
102623206
cit-r.1
for
102618715
sly-u.5
for
MBD5
sly-u.5
for
101267579
sot-r.1
for
102579273
sot-r.1
for
102585353
sot-r.1
for
102595289
nta-r.1
for
107832011
nta-r.1
for
107804382
nta-r.1
for
107785555


Ortholog ID: 2480
Species ppo ppo ppo gma gma mtr mtr ath ath ath bra vvi vvi ghi ghi bna cit sly sly sot sot sot nta nta nta
Symbol LOC7488137 LOC7485704 LOC7488117 LOC100795916 LOC100779601 LOC25491275 LOC11412807 MBD5 MBD6 MBD7 LOC103846163 LOC100853337 LOC100255377 LOC107933455 LOC107959114 LOC106373484 LOC102618715 MBD5 LOC101267579 LOC102579273 LOC102585353 LOC107057998 LOC107832011 LOC107804382 LOC107785555
Function* methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 7-like methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 7 methyl-CPG-binding domain protein 5 methyl-CPG-binding domain 6 methyl-CPG-binding domain 7 methyl-CpG-binding domain-containing protein 6 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 5 uncharacterized LOC102618715 methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7 uncharacterized LOC102579273 methyl-CpG-binding domain-containing protein 7 uncharacterized LOC107057998 methyl-CpG-binding domain-containing protein 5-like methyl-CpG-binding domain-containing protein 5 methyl-CpG-binding domain-containing protein 7
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
ppo01230 Biosynthesis of amino acids 4
ppo00071 Fatty acid degradation 2
ppo00350 Tyrosine metabolism 2
ppo00740 Riboflavin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 3
ppo04145 Phagosome 3
ppo04142 Lysosome 3
ppo00900 Terpenoid backbone biosynthesis 2
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00541 Biosynthesis of various nucleotide sugars 2
ath01250 Biosynthesis of nucleotide sugars 2
ath04517 IgSF CAM signaling 2
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 6
sly03250 Viral life cycle - HIV-1 2
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00430 Taurine and hypotaurine metabolism 4
sot00561 Glycerolipid metabolism 3
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 7
nta04016 MAPK signaling pathway - plant 4
nta04070 Phosphatidylinositol signaling system 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04070 Phosphatidylinositol signaling system 4
nta04075 Plant hormone signal transduction 4
nta04626 Plant-pathogen interaction 4
nta04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00240 Pyrimidine metabolism 3
nta01232 Nucleotide metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7488137 7485704 7488117 100795916 100779601 25491275 11412807 823811 836057 836101 103846163 100853337 100255377 107933455 107959114 106373484 102618715 101267088 101267579 102579273 102585353 107057998 107832011 107804382 107785555
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