ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-m.4	7489295	uncharacterized LOC7489295
ppo-u.5	7489295	uncharacterized LOC7489295
ppo-r.4	7489295	uncharacterized LOC7489295
ppo-u.5	18094990	uncharacterized LOC18094990
gma-u.5	100794016	RING finger and U-box domain-containing protein
gma-u.5	100793230	RING finger domain-containing protein
mtr-u.5	25486843	uncharacterized LOC25486843
mtr-u.5	11432860	uncharacterized LOC11432860
ath-u.5	AT2G44410	RING/U-box superfamily protein
bra-r.6	103866792	uncharacterized LOC103866792
vvi-u.5	100246046	uncharacterized LOC100246046
bna-r.1	106396562	uncharacterized LOC106396562
bna-r.1	106396412	uncharacterized LOC106396412
cit-r.1	102624790	uncharacterized LOC102624790
sly-u.5	101248399	uncharacterized LOC101248399
sly-u.5	101250440	uncharacterized LOC101250440
sot-r.1	102598553	uncharacterized LOC102598553
sot-r.1	102579795	uncharacterized LOC102579795
nta-r.1	107778029	uncharacterized LOC107778029
nta-r.1	107790040	uncharacterized LOC107790040
nta-r.1	107819064	uncharacterized LOC107819064

Annotation

functional annotation

KEGG

GO BP

GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process

(340 genes)

IEA

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(618 genes)

IEA

GO MF

GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding	(45 genes)	IEA
GO:0061630 [list] [network] ubiquitin protein ligase activity	(225 genes)	IEA

Protein

XP_002314225.4 [sequence] [blastp]
XP_024464747.2 [sequence] [blastp]
XP_024464748.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_002314225.4)
nucl 9	(predict for XP_024464747.2)
nucl 7, cyto 1, extr 1, vacu 1, cysk 1	(predict for XP_024464748.2)

Subcellular
localization
TargetP

other 8	(predict for XP_002314225.4)
other 8	(predict for XP_024464747.2)
other 8	(predict for XP_024464748.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7489295	ppo-u.5 for 7489295	ppo-r.4 for 7489295	ppo-u.5 for 18094990	gma-u.5 for 100794016	gma-u.5 for 100793230	mtr-u.5 for 25486843	mtr-u.5 for 11432860	ath-u.5 for AT2G44410	bra-r.6 for 103866792	vvi-u.5 for 100246046	bna-r.1 for 106396562	bna-r.1 for 106396412	cit-r.1 for 102624790	sly-u.5 for 101248399	sly-u.5 for 101250440	sot-r.1 for 102598553	sot-r.1 for 102579795	nta-r.1 for 107778029	nta-r.1 for 107790040	nta-r.1 for 107819064

Ortholog

Ortholog ID: 11277

Species

ppo

gma

mtr

ath

bra

vvi

bna

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC7489295

uncharacterized LOC18094990

RING finger and U-box domain-containing protein

RING finger domain-containing protein

uncharacterized LOC25486843

uncharacterized LOC11432860

RING/U-box superfamily protein

uncharacterized LOC103866792

uncharacterized LOC100246046

uncharacterized LOC106396562

uncharacterized LOC106396412

uncharacterized LOC102624790

uncharacterized LOC101248399

uncharacterized LOC101250440

uncharacterized LOC102598553

uncharacterized LOC102579795

uncharacterized LOC107790040

uncharacterized LOC107819064

uncharacterized LOC107831866

Coexmap

Please wait a moment.

Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	3
ath04712	Circadian rhythm - plant	3
ath04130	SNARE interactions in vesicular transport	2
ath03083	Polycomb repressive complex	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	8
sly03060	Protein export	5
sly04145	Phagosome	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03018	RNA degradation	2
sly04075	Plant hormone signal transduction	2
sly04626	Plant-pathogen interaction	2
sly00020	Citrate cycle (TCA cycle)	2
sly01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2
nta00051	Fructose and mannose metabolism	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01240	Biosynthesis of cofactors	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

7489295

18094990

100794016

100793230

25486843

11432860

819048

103866792

100246046

106396562

106396412

102624790

101248399

101250440

102598553

102579795

107790040

107819064

107831866

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7489295 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7489295 (ppo-m.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	bna	cit	sly	sot	nta	tae	zma	ghi	bdi	osa	sbi	hvu	cre
Paralog	4	2	2	1	1	1	2	1	2	2	3	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7489295 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7489295 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**