ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-m.4	7491167	alpha-L-fucosidase 1
ppo-u.5	7491167	alpha-L-fucosidase 1
ppo-r.4	7491167	alpha-L-fucosidase 1
gma-u.5	100807583	alpha-L-fucosidase 1
mtr-u.5	11420126	alpha-L-fucosidase 1
ath-u.5	FUC1	alpha-L-fucosidase 1
bra-r.6	103864822	alpha-L-fucosidase 1
vvi-u.5	100255173	alpha-L-fucosidase 1
ghi-r.1	107948258	alpha-L-fucosidase 1
bna-r.1	125608044	alpha-L-fucosidase 1-like
bna-r.1	106423928	alpha-L-fucosidase 1
cit-r.1	102608264	alpha-L-fucosidase 1
sly-u.5	101249430	alpha-L-fucosidase 1
sot-r.1	102587787	alpha-L-fucosidase 1
nta-r.1	107801422	alpha-L-fucosidase 1
nta-r.1	107825697	alpha-L-fucosidase 1
zma-u.5	100192871	alpha-L-fucosidase 1
tae-r.2	123054188	putative alpha-L-fucosidase 1

Annotation

functional annotation

KEGG

pop00511 [list] [network] Other glycan degradation (25 genes)

pop04142 [list] [network] Lysosome (97 genes)

GO BP

GO:0006004 [list] [network] fucose metabolic process	(3 genes)	IEA
GO:0016139 [list] [network] glycoside catabolic process	(3 genes)	IEA

GO CC

GO:0005764 [list] [network] lysosome

(63 genes)

IEA

GO MF

GO:0004560 [list] [network] alpha-L-fucosidase activity

(7 genes)

IEA

Protein

XP_002313533.2 [sequence] [blastp]

Subcellular
localization
wolf

extr 4, vacu 2, chlo 1, nucl 1, cyto 1, mito 1, plas 1, cyto_nucl 1, chlo_mito 1, nucl_plas 1, mito_plas 1, cyto_plas 1

(predict for XP_002313533.2)

Subcellular
localization
TargetP

scret 8

(predict for XP_002313533.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7491167	ppo-u.5 for 7491167	ppo-r.4 for 7491167	gma-u.5 for 100807583	mtr-u.5 for 11420126	ath-u.5 for FUC1	bra-r.6 for 103864822	vvi-u.5 for 100255173	ghi-r.1 for 107948258	bna-r.1 for 125608044	bna-r.1 for 106423928	cit-r.1 for 102608264	sly-u.5 for 101249430	sot-r.1 for 102587787	nta-r.1 for 107801422	nta-r.1 for 107825697	zma-u.5 for 100192871	tae-r.2 for 123054188

Ortholog

Ortholog ID: 12183

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

zma

tae

Symbol

FUC1

Function^*

alpha-L-fucosidase 1

alpha-L-fucosidase 1-like

alpha-L-fucosidase 1

putative alpha-L-fucosidase 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00510	N-Glycan biosynthesis	4
gma00513	Various types of N-glycan biosynthesis	4
gma04141	Protein processing in endoplasmic reticulum	4
gma00900	Terpenoid backbone biosynthesis	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00330	Arginine and proline metabolism	7
mtr00360	Phenylalanine metabolism	7
mtr00380	Tryptophan metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04142	Lysosome	2
bra00220	Arginine biosynthesis	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04146	Peroxisome	2
vvi00860	Porphyrin metabolism	2
vvi00071	Fatty acid degradation	2
vvi01212	Fatty acid metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03022	Basal transcription factors	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	2
bna00511	Other glycan degradation	2
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00010	Glycolysis / Gluconeogenesis	4
cit01200	Carbon metabolism	3
cit01230	Biosynthesis of amino acids	3
cit00513	Various types of N-glycan biosynthesis	2
cit00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly00510	N-Glycan biosynthesis	3
sly00513	Various types of N-glycan biosynthesis	3
sly04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot04626	Plant-pathogen interaction	2
sot04141	Protein processing in endoplasmic reticulum	2
sot04145	Phagosome	2
sot04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	2
nta04142	Lysosome	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	2
nta04142	Lysosome	2
nta04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	2
zma04120	Ubiquitin mediated proteolysis	2
zma04141	Protein processing in endoplasmic reticulum	2

Expression

Expression pattern

Entrez Gene ID^*

7491167

100807583

11420126

817355

103864822

100255173

107948258

125608044

106423928

102608264

101249430

102587787

107801422

107825697

100192871

123054188

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7491167 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7491167 (ppo-m.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	zma	tae	cre	hvu	bdi	osa	sbi
Paralog	3	1	1	1	1	1	1	2	1	1	1	2	1	1	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7491167 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7491167 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**