ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-m.4	7491970	protein FATTY ACID EXPORT 2, chloroplastic
ppo-u.5	7491970	protein FATTY ACID EXPORT 2, chloroplastic
ppo-r.4	7491970	protein FATTY ACID EXPORT 2, chloroplastic
ppo-u.5	18094144	protein FATTY ACID EXPORT 1, chloroplastic
ppo-u.5	18095964	protein FATTY ACID EXPORT 5
ppo-u.5	7491868	protein FATTY ACID EXPORT 1, chloroplastic
gma-u.5	100306195	protein FATTY ACID EXPORT 6-like
gma-u.5	100777952	protein FATTY ACID EXPORT 1, chloroplastic
gma-u.5	100796329	protein FATTY ACID EXPORT 2, chloroplastic
mtr-u.5	25494153	protein FATTY ACID EXPORT 2, chloroplastic
mtr-u.5	11418124	protein FATTY ACID EXPORT 1, chloroplastic
mtr-u.5	11431519	protein FATTY ACID EXPORT 5
ath-u.5	AT2G26240	Transmembrane proteins 14C
ath-u.5	AT3G20510	Transmembrane proteins 14C
ath-u.5	AT3G43520	Transmembrane proteins 14C
bra-r.6	103873633	protein FATTY ACID EXPORT 2, chloroplastic
bra-r.6	103830092	protein FATTY ACID EXPORT 1, chloroplastic
bra-r.6	103841635	protein FATTY ACID EXPORT 1, chloroplastic
vvi-u.5	100255501	protein FATTY ACID EXPORT 1, chloroplastic
vvi-u.5	100244242	protein FATTY ACID EXPORT 2, chloroplastic
vvi-u.5	100245239	protein FATTY ACID EXPORT 5
ghi-r.1	107929922	protein FATTY ACID EXPORT 2, chloroplastic
ghi-r.1	121213825	protein FATTY ACID EXPORT 5
ghi-r.1	107951800	protein FATTY ACID EXPORT 1, chloroplastic
bna-r.1	125607028	protein FATTY ACID EXPORT 6-like
bna-r.1	125601458	protein FATTY ACID EXPORT 6-like
bna-r.1	125588702	protein FATTY ACID EXPORT 5-like
cit-r.1	102629564	protein FATTY ACID EXPORT 2, chloroplastic
cit-r.1	102609654	protein FATTY ACID EXPORT 6
cit-r.1	102609961	protein FATTY ACID EXPORT 6-like
sly-u.5	101258058	protein FATTY ACID EXPORT 1, chloroplastic
sly-u.5	101250634	protein FATTY ACID EXPORT 5-like
sot-r.1	102605454	protein FATTY ACID EXPORT 1, chloroplastic
sot-r.1	102590318	protein FATTY ACID EXPORT 1, chloroplastic-like
sot-r.1	102584920	protein FATTY ACID EXPORT 5
nta-r.1	107760094	protein FATTY ACID EXPORT 6
nta-r.1	107780504	uncharacterized LOC107780504
nta-r.1	142172996	uncharacterized LOC142172996
osa-u.5	4340827	protein FATTY ACID EXPORT 1, chloroplastic
osa-u.5	4337241	protein FATTY ACID EXPORT 7
osa-u.5	4336119	protein FATTY ACID EXPORT 5
zma-u.5	100217059	uncharacterized LOC100217059
zma-u.5	100192926	uncharacterized LOC100192926
zma-u.5	103632000	protein FATTY ACID EXPORT 1, chloroplastic
tae-r.2	123189492	protein FATTY ACID EXPORT 1, chloroplastic
tae-r.2	123169034	protein FATTY ACID EXPORT 5
tae-r.2	123167755	protein FATTY ACID EXPORT 1, chloroplastic
hvu-r.1	123425885	protein FATTY ACID EXPORT 6-like
hvu-r.1	123406929	protein FATTY ACID EXPORT 5-like
hvu-r.1	123410696	protein FATTY ACID EXPORT 1, chloroplastic-like
sbi-r.1	8063039	protein FATTY ACID EXPORT 5
sbi-r.1	8084048	protein FATTY ACID EXPORT 5
sbi-r.1	8060724	protein FATTY ACID EXPORT 1, chloroplastic
bdi-r.1	100846383	protein FATTY ACID EXPORT 1, chloroplastic
bdi-r.1	100826827	protein FATTY ACID EXPORT 5
bdi-r.1	100840081	protein FATTY ACID EXPORT 7
cre-r.1	CHLRE_10g421750v5	uncharacterized protein
cre-r.1	CHLRE_08g383300v5	uncharacterized protein
cre-r.1	CHLRE_08g366000v5	uncharacterized protein

Top 50 coexpressed genes to 7491970 (ppo-m.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7491970 (ppo-m.4 coexpression data)

CoexMap"7491970"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(3780 genes)

IEA

GO MF

Protein

XP_002309449.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, chlo_mito 5

(predict for XP_002309449.2)

Subcellular
localization
TargetP

chlo 6

(predict for XP_002309449.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-m.4 for 7491970	ppo-u.5 for 7491970	ppo-r.4 for 7491970	ppo-u.5 for 18094144	ppo-u.5 for 18095964	ppo-u.5 for 7491868	gma-u.5 for 100306195	gma-u.5 for 100777952	gma-u.5 for 100796329	mtr-u.5 for 25494153	mtr-u.5 for 11418124	mtr-u.5 for 11431519	ath-u.5 for AT2G26240	ath-u.5 for AT3G20510	ath-u.5 for AT3G43520	bra-r.6 for 103873633	bra-r.6 for 103830092	bra-r.6 for 103841635	vvi-u.5 for 100255501	vvi-u.5 for 100244242	vvi-u.5 for 100245239	ghi-r.1 for 107929922	ghi-r.1 for 121213825	ghi-r.1 for 107951800	bna-r.1 for 125607028	bna-r.1 for 125601458	bna-r.1 for 125588702	cit-r.1 for 102629564	cit-r.1 for 102609654	cit-r.1 for 102609961	sly-u.5 for 101258058	sly-u.5 for 101250634	sot-r.1 for 102605454	sot-r.1 for 102590318	sot-r.1 for 102584920	nta-r.1 for 107760094	nta-r.1 for 107780504	nta-r.1 for 142172996	osa-u.5 for 4340827	osa-u.5 for 4337241	osa-u.5 for 4336119	zma-u.5 for 100217059	zma-u.5 for 100192926	zma-u.5 for 103632000	tae-r.2 for 123189492	tae-r.2 for 123169034	tae-r.2 for 123167755	hvu-r.1 for 123425885	hvu-r.1 for 123406929	hvu-r.1 for 123410696	sbi-r.1 for 8063039	sbi-r.1 for 8084048	sbi-r.1 for 8060724	bdi-r.1 for 100846383	bdi-r.1 for 100826827	bdi-r.1 for 100840081	cre-r.1 for CHLRE_10g421750v5	cre-r.1 for CHLRE_08g383300v5	cre-r.1 for CHLRE_08g366000v5

Ortholog

Ortholog ID: 587

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 6-like

uncharacterized LOC100796521

protein FATTY ACID EXPORT 2, chloroplastic

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5

Transmembrane proteins 14C

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 2, chloroplastic

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 2, chloroplastic

protein FATTY ACID EXPORT 6

protein FATTY ACID EXPORT 5-like

protein FATTY ACID EXPORT 7

protein FATTY ACID EXPORT 2, chloroplastic

protein FATTY ACID EXPORT 6-like

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5-like

uncharacterized LOC101247769

protein FATTY ACID EXPORT 1, chloroplastic-like

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 5-like

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5-like

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 7

protein FATTY ACID EXPORT 5

dachshund homolog 1-like

uncharacterized LOC100276307

uncharacterized LOC100278097

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 5-like

protein FATTY ACID EXPORT 1, chloroplastic-like

protein FATTY ACID EXPORT 7-like

protein FATTY ACID EXPORT 5

protein FATTY ACID EXPORT 1, chloroplastic

protein FATTY ACID EXPORT 7

protein FATTY ACID EXPORT 1, chloroplastic

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00740	Riboflavin metabolism	2
ppo01240	Biosynthesis of cofactors	2
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	7
ppo00020	Citrate cycle (TCA cycle)	2
ppo01200	Carbon metabolism	2
ppo00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	6
gma00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	4
mtr00620	Pyruvate metabolism	2
mtr01200	Carbon metabolism	2
mtr01230	Biosynthesis of amino acids	2
mtr00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	6
mtr00190	Oxidative phosphorylation	3
mtr03060	Protein export	2
mtr04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04070	Phosphatidylinositol signaling system	4
mtr04626	Plant-pathogen interaction	4
mtr04016	MAPK signaling pathway - plant	3
mtr04075	Plant hormone signal transduction	3
mtr04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	8
ath00020	Citrate cycle (TCA cycle)	6
ath01210	2-Oxocarboxylic acid metabolism	6
ath00010	Glycolysis / Gluconeogenesis	4
ath00630	Glyoxylate and dicarboxylate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	2
bra04120	Ubiquitin mediated proteolysis	2
bra03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	4
bra04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3
vvi00190	Oxidative phosphorylation	3
vvi03060	Protein export	2
vvi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	6
ghi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03272	Virion - Hepatitis viruses	2
ghi04144	Endocytosis	2
ghi04141	Protein processing in endoplasmic reticulum	2
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00562	Inositol phosphate metabolism	3
bna04070	Phosphatidylinositol signaling system	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna01240	Biosynthesis of cofactors	4
bna00290	Valine, leucine and isoleucine biosynthesis	4
bna00660	C5-Branched dibasic acid metabolism	4
bna01210	2-Oxocarboxylic acid metabolism	4
bna01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	5
cit00020	Citrate cycle (TCA cycle)	2
cit00270	Cysteine and methionine metabolism	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04141	Protein processing in endoplasmic reticulum	3
cit03060	Protein export	2
cit04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	6
cit00020	Citrate cycle (TCA cycle)	4
cit01210	2-Oxocarboxylic acid metabolism	3
cit00640	Propanoate metabolism	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2
sly01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	5
sly00510	N-Glycan biosynthesis	4
sly00513	Various types of N-glycan biosynthesis	4
sly00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sly01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	6
sot00020	Citrate cycle (TCA cycle)	4
sot04141	Protein processing in endoplasmic reticulum	3
sot00640	Propanoate metabolism	3
sot00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	3
nta00270	Cysteine and methionine metabolism	2
nta00920	Sulfur metabolism	2
nta04122	Sulfur relay system	2
nta00350	Tyrosine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	4
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04141	Protein processing in endoplasmic reticulum	2
osa03060	Protein export	2
osa03020	RNA polymerase	2
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	4
zma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	5
zma00053	Ascorbate and aldarate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03018	RNA degradation	2
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00920	Sulfur metabolism	3
tae04016	MAPK signaling pathway - plant	3
tae04070	Phosphatidylinositol signaling system	3
tae04075	Plant hormone signal transduction	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	7
tae00650	Butanoate metabolism	4
tae00071	Fatty acid degradation	4
tae01212	Fatty acid metabolism	4
tae00410	beta-Alanine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00650	Butanoate metabolism	4
tae01200	Carbon metabolism	3
tae00071	Fatty acid degradation	3
tae00280	Valine, leucine and isoleucine degradation	3
tae00310	Lysine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00520	Amino sugar and nucleotide sugar metabolism	2
hvu01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04146	Peroxisome	4
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04142	Lysosome	3
sbi04141	Protein processing in endoplasmic reticulum	3
sbi00600	Sphingolipid metabolism	2
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03018	RNA degradation	2
bdi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00190	Oxidative phosphorylation	6
bdi04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	5
cre00020	Citrate cycle (TCA cycle)	3
cre01200	Carbon metabolism	3
cre00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00190	Oxidative phosphorylation	4

Expression

Expression pattern

Entrez Gene ID^*

18094144

18095964

7491868

100306195

100796521

100814901

25494153

11418124

11431519

817164

824895

841496

103830092

103871319

100255501

100244242

100245239

107929922

121231960

107903343

125610091

125578523

106410246

102629564

102609961

102610745

101258058

101250634

101247769

102590318

102584920

102591810

107780914

107806224

107831072

4340827

4337241

4333338

103642135

100276307

100278097

123169034

123167755

123151382

123406929

123410696

123428099

8063039

8060724

8058686

100846383

100840081

100834567

5728257

66054531

5721660

The preparation time of this page was 0.9 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	6	3	3	3	3	3	3	3	3	2	3	3	3	3	3	3	3	3	3

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7491970 (ppo-m.4 coexpression data)

Top 50 enrichment test to 7491970 (ppo-m.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**