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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-m.4   7496142   nuclear transcription factor Y subunit A-10 
 ppo-u.5   7496142   nuclear transcription factor Y subunit A-10 
 ppo-r.4   7496142   nuclear transcription factor Y subunit A-10 
 ghi-r.1   107921027   nuclear transcription factor Y subunit A-9 
 ghi-r.1   107937210   nuclear transcription factor Y subunit A-1 
 ghi-r.1   107950792   nuclear transcription factor Y subunit A-1 
 cit-r.1   102620218   nuclear transcription factor Y subunit A-1-like 

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Top 50 coexpressed genes to 7496142 (ppo-m.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7496142 (ppo-m.4 coexpression data)

CoexMap"7496142"


ppoLOC7496142 | Entrez gene ID : 7496142    
Species ppo ghi cit cre vvi ath mtr hvu bna tae osa gma zma sly sbi bra nta bdi sot
Paralog 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (481 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (26 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (266 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (338 genes)  IEA  
Protein XP_002308961.4 [sequence] [blastp]
XP_052309487.1 [sequence] [blastp]
XP_052309488.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002308961.4)
nucl 9  (predict for XP_052309487.1)
nucl 9  (predict for XP_052309488.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for XP_002308961.4)
mito 5,  other 4  (predict for XP_052309487.1)
mito 5,  other 4  (predict for XP_052309488.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-m.4
for
7496142
ppo-u.5
for
7496142
ppo-r.4
for
7496142
ghi-r.1
for
107921027
ghi-r.1
for
107937210
ghi-r.1
for
107950792
cit-r.1
for
102620218


Ortholog ID: 19875
Species ppo ghi ghi ghi cit
Symbol LOC7496142 LOC107921027 LOC107937210 LOC107951979 LOC102620218
Function* nuclear transcription factor Y subunit A-10 nuclear transcription factor Y subunit A-9 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1 nuclear transcription factor Y subunit A-1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
ghi04517 IgSF CAM signaling 2
ghi04518 Integrin signaling 2
ghi04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
cit00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7496142 107921027 107937210 107951979 102620218
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