ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	18100293	uncharacterized LOC18100293
ppo-u.5	18100293	uncharacterized LOC18100293
gma-u.5	100817225	uncharacterized LOC100817225
gma-u.5	100806863	uncharacterized LOC100806863
gma-u.5	100782725	uncharacterized LOC100782725
mtr-u.5	11428331	uncharacterized LOC11428331
mtr-u.5	25486555	uncharacterized LOC25486555
ath-u.5	AT3G43110	uncharacterized protein
ath-u.5	AT5G20790	uncharacterized protein
bra-r.6	103856462	uncharacterized LOC103856462
bra-r.6	103851374	uncharacterized LOC103851374
bra-r.6	103845644	uncharacterized LOC103845644
vvi-u.5	100245572	uncharacterized LOC100245572
ghi-r.1	107907083	uncharacterized LOC107907083
ghi-r.1	107958830	uncharacterized LOC107958830
bna-r.1	125584151	uncharacterized LOC125584151
bna-r.1	106386991	uncharacterized LOC106386991
cit-r.1	107176463	hypothetical protein
cit-r.1	102608396	uncharacterized LOC102608396
sly-u.5	101244203	uncharacterized LOC101244203
sot-r.1	102589679	uncharacterized LOC102589679
nta-r.1	107821669	uncharacterized LOC107821669
nta-r.1	107769213	uncharacterized LOC107769213
nta-r.1	107790985	uncharacterized LOC107790985
osa-u.5	4347159	uncharacterized LOC4347159
zma-u.5	103647459	uncharacterized LOC103647459
zma-u.5	100274796	uncharacterized LOC100274796
tae-r.2	123107060	uncharacterized LOC123107060
tae-r.2	123116185	uncharacterized LOC123116185
tae-r.2	123124810	uncharacterized LOC123124810
hvu-r.1	123396878	uncharacterized LOC123396878
sbi-r.1	8080990	uncharacterized LOC8080990
bdi-r.1	100827723	uncharacterized LOC100827723

Top 50 coexpressed genes to 18100293 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 18100293 (ppo-r.4 coexpression data)

CoexMap"18100293"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_024459258.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, cyto 3, extr 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_024459258.2)

Subcellular
localization
TargetP

other 3

(predict for XP_024459258.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 18100293	ppo-u.5 for 18100293	gma-u.5 for 100817225	gma-u.5 for 100806863	gma-u.5 for 100782725	mtr-u.5 for 11428331	mtr-u.5 for 25486555	ath-u.5 for AT3G43110	ath-u.5 for AT5G20790	bra-r.6 for 103856462	bra-r.6 for 103851374	bra-r.6 for 103845644	vvi-u.5 for 100245572	ghi-r.1 for 107907083	ghi-r.1 for 107958830	bna-r.1 for 125584151	bna-r.1 for 106386991	cit-r.1 for 107176463	cit-r.1 for 102608396	sly-u.5 for 101244203	sot-r.1 for 102589679	nta-r.1 for 107821669	nta-r.1 for 107769213	nta-r.1 for 107790985	osa-u.5 for 4347159	zma-u.5 for 103647459	zma-u.5 for 100274796	tae-r.2 for 123107060	tae-r.2 for 123116185	tae-r.2 for 123124810	hvu-r.1 for 123396878	sbi-r.1 for 8080990	bdi-r.1 for 100827723

Ortholog

Ortholog ID: 4739

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC18100293

uncharacterized LOC100817225

uncharacterized LOC100806863

uncharacterized LOC100782725

uncharacterized LOC11428331

uncharacterized LOC25486555

uncharacterized protein

uncharacterized LOC103856462

uncharacterized LOC103851374

uncharacterized LOC103845644

uncharacterized LOC100245572

uncharacterized LOC107907083

uncharacterized LOC107958830

uncharacterized LOC125584151

uncharacterized LOC106386991

hypothetical protein

uncharacterized LOC102608396

uncharacterized LOC101244203

uncharacterized LOC102589679

uncharacterized LOC107821669

uncharacterized LOC107769213

uncharacterized LOC142168091

uncharacterized LOC4347159

uncharacterized LOC103647459

uncharacterized LOC100274796

uncharacterized LOC123107060

uncharacterized LOC123116185

uncharacterized LOC123124810

uncharacterized LOC123396878

uncharacterized LOC8080990

uncharacterized LOC100827723

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	3
ppo00561	Glycerolipid metabolism	2
ppo00566	Sulfoquinovose metabolism	2
ppo00740	Riboflavin metabolism	2
ppo04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00710	Carbon fixation by Calvin cycle	3
gma01200	Carbon metabolism	3
gma00561	Glycerolipid metabolism	2
gma00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00561	Glycerolipid metabolism	3
gma00564	Glycerophospholipid metabolism	2
gma00740	Riboflavin metabolism	2
gma04142	Lysosome	2
gma00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00906	Carotenoid biosynthesis	3
gma00740	Riboflavin metabolism	2
gma04142	Lysosome	2
gma00561	Glycerolipid metabolism	2
gma00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00750	Vitamin B6 metabolism	6
mtr01240	Biosynthesis of cofactors	6
mtr00561	Glycerolipid metabolism	3
mtr00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	5
mtr00750	Vitamin B6 metabolism	4
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2
ath00561	Glycerolipid metabolism	2
ath00750	Vitamin B6 metabolism	2
ath01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00561	Glycerolipid metabolism	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00740	Riboflavin metabolism	2
bra04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00750	Vitamin B6 metabolism	3
bra01240	Biosynthesis of cofactors	3
bra00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	3
vvi00750	Vitamin B6 metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	3
ghi00566	Sulfoquinovose metabolism	2
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00561	Glycerolipid metabolism	3
ghi00566	Sulfoquinovose metabolism	2
ghi00750	Vitamin B6 metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	4
bna00564	Glycerophospholipid metabolism	2
bna00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00561	Glycerolipid metabolism	4
bna00564	Glycerophospholipid metabolism	2
bna00566	Sulfoquinovose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3
cit00740	Riboflavin metabolism	2
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3
cit00740	Riboflavin metabolism	2
cit04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00750	Vitamin B6 metabolism	2
sly01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00750	Vitamin B6 metabolism	2
sot01240	Biosynthesis of cofactors	2
sot00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00564	Glycerophospholipid metabolism	3
nta00750	Vitamin B6 metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00750	Vitamin B6 metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00750	Vitamin B6 metabolism	3
nta01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00561	Glycerolipid metabolism	2
osa00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00564	Glycerophospholipid metabolism	4
zma00740	Riboflavin metabolism	2
zma04142	Lysosome	2
zma00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00564	Glycerophospholipid metabolism	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00564	Glycerophospholipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

18100293

100817225

100806863

100782725

11428331

25486555

823370

832202

103856462

103851374

103845644

100245572

107907083

107958830

125584151

106386991

107176463

102608396

101244203

102589679

107821669

107769213

142168091

4347159

103647459

100274796

123107060

123116185

123124810

123396878

8080990

100827723

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	3	2	2	3	1	2	2	2	1	1	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 18100293 (ppo-r.4 coexpression data)

Top 50 enrichment test to 18100293 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**