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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7454598   uncharacterized LOC7454598 
 ppo-u.5   7454598   uncharacterized LOC7454598 
 ppo-m.4   7454598   uncharacterized LOC7454598 
 gma-u.5   100795720   uncharacterized LOC100795720 
 gma-u.5   100800114   uncharacterized LOC100800114 
 gma-u.5   100819662   uncharacterized LOC100819662 
 mtr-u.5   25487276   uncharacterized LOC25487276 
 ath-u.5   AT1G53200   TAF RNA polymerase I subunit A 
 bra-r.6   103868447   uncharacterized LOC103868447 
 vvi-u.5   100265827   uncharacterized LOC100265827 
 ghi-r.1   107948744   uncharacterized LOC107948744 
 ghi-r.1   121216841   uncharacterized LOC121216841 
 bna-r.1   106407613   uncharacterized LOC106407613 
 bna-r.1   106454969   uncharacterized LOC106454969 
 cit-r.1   102626198   uncharacterized LOC102626198 
 sly-u.5   101256747   uncharacterized LOC101256747 
 sot-r.1   102580117   uncharacterized LOC102580117 
 nta-r.1   107772477   uncharacterized LOC107772477 
 nta-r.1   107770721   uncharacterized LOC107770721 
 osa-u.5   4340633   uncharacterized LOC4340633 
 zma-u.5   100191461   uncharacterized LOC100191461 
 tae-r.2   123149269   uncharacterized LOC123149269 
 tae-r.2   123108115   uncharacterized LOC123108115 
 hvu-r.1   123413125   uncharacterized LOC123413125 
 hvu-r.1   123413127   uncharacterized LOC123413127 
 sbi-r.1   8061491   uncharacterized LOC8061491 
 bdi-r.1   100824956   uncharacterized LOC100824956 

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Top 50 coexpressed genes to 7454598 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7454598 (ppo-r.4 coexpression data)

CoexMap"7454598"


ppoLOC7454598 | Entrez gene ID : 7454598    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 1 1 1 1 2 2 1 1 1 2 1 1 2 2 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006360 [list] [network] transcription by RNA polymerase I  (10 genes)  IEA  
GO CC
GO:0000120 [list] [network] RNA polymerase I transcription regulator complex  (2 genes)  IEA  
GO MF
Protein XP_024437676.2 [sequence] [blastp]
XP_024437677.2 [sequence] [blastp]
XP_024437678.2 [sequence] [blastp]
XP_024437679.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024437676.2)
nucl 9  (predict for XP_024437677.2)
nucl 9  (predict for XP_024437678.2)
nucl 7,  chlo 1,  plas 1  (predict for XP_024437679.2)
Subcellular
localization
TargetP
other 9  (predict for XP_024437676.2)
other 9  (predict for XP_024437677.2)
other 9  (predict for XP_024437678.2)
other 8  (predict for XP_024437679.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7454598
ppo-u.5
for
7454598
ppo-m.4
for
7454598
gma-u.5
for
100795720
gma-u.5
for
100800114
gma-u.5
for
100819662
mtr-u.5
for
25487276
ath-u.5
for
AT1G53200
bra-r.6
for
103868447
vvi-u.5
for
100265827
ghi-r.1
for
107948744
ghi-r.1
for
121216841
bna-r.1
for
106407613
bna-r.1
for
106454969
cit-r.1
for
102626198
sly-u.5
for
101256747
sot-r.1
for
102580117
nta-r.1
for
107772477
nta-r.1
for
107770721
osa-u.5
for
4340633
zma-u.5
for
100191461
tae-r.2
for
123149269
tae-r.2
for
123108115
hvu-r.1
for
123413125
hvu-r.1
for
123413127
sbi-r.1
for
8061491
bdi-r.1
for
100824956


Ortholog ID: 7840
Species ppo gma gma gma mtr ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu hvu sbi bdi
Symbol LOC7454598 LOC100795720 LOC100800114 LOC100819662 LOC25487276 AT1G53200 LOC103868447 LOC100265827 LOC107948744 LOC121216841 LOC106454969 LOC106451591 LOC102626198 LOC101256747 LOC102580117 LOC107772477 LOC107770721 LOC4340633 LOC100191461 LOC123149269 LOC123108115 LOC123413125 LOC123413127 LOC8061491 LOC100824956
Function* uncharacterized LOC7454598 uncharacterized LOC100795720 uncharacterized LOC100800114 uncharacterized LOC100819662 uncharacterized LOC25487276 TAF RNA polymerase I subunit A uncharacterized LOC103868447 uncharacterized LOC100265827 uncharacterized LOC107948744 uncharacterized LOC121216841 uncharacterized LOC106454969 uncharacterized LOC106451591 uncharacterized LOC102626198 uncharacterized LOC101256747 uncharacterized LOC102580117 uncharacterized LOC107772477 uncharacterized LOC107770721 uncharacterized LOC4340633 uncharacterized LOC100191461 uncharacterized LOC123149269 uncharacterized LOC123108115 uncharacterized LOC123413125 uncharacterized LOC123413127 uncharacterized LOC8061491 uncharacterized LOC100824956
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 7
gma03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 5
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7454598 100795720 100800114 100819662 25487276 841754 103868447 100265827 107948744 121216841 106454969 106451591 102626198 101256747 102580117 107772477 107770721 4340633 100191461 123149269 123108115 123413125 123413127 8061491 100824956
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