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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7456019   uncharacterized LOC7456019 
 ppo-u.5   7456019   uncharacterized LOC7456019 
 ppo-m.4   7456019   uncharacterized LOC7456019 
 gma-u.5   100817676   RRP15-like protein 
 gma-u.5   100780091   RRP15-like protein-like 
 mtr-u.5   120579661   RRP15-like protein 
 ath-u.5   AT5G48240   Rrp15p protein 
 bra-r.6   103874938   RRP15-like protein 
 bra-r.6   103837243   RRP15-like protein 
 vvi-u.5   100249313   uncharacterized LOC100249313 
 ghi-r.1   107955303   RRP15-like protein 
 ghi-r.1   107912474   RRP15-like protein 
 ghi-r.1   107954735   RRP15-like protein 
 bna-r.1   106365821   RRP15-like protein 
 bna-r.1   111197885   RRP15-like protein 
 bna-r.1   106428099   RRP15-like protein 
 cit-r.1   102630811   uncharacterized LOC102630811 
 sly-u.5   101255093   uncharacterized LOC101255093 
 sot-r.1   102587408   RRP15-like protein 
 nta-r.1   107784302   uncharacterized LOC107784302 
 nta-r.1   107771274   uncharacterized LOC107771274 
 osa-u.5   4350250   uncharacterized LOC4350250 
 zma-u.5   100280074   uncharacterized LOC100280074 
 tae-r.2   123109047   RRP15-like protein 
 tae-r.2   123180273   RRP15-like protein 
 tae-r.2   123189482   RRP15-like protein 
 hvu-r.1   123412014   RRP15-like protein 
 sbi-r.1   8081596   RRP15-like protein 
 bdi-r.1   100835705   RRP15-like protein 

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Top 50 coexpressed genes to 7456019 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456019 (ppo-r.4 coexpression data)

CoexMap"7456019"


ppoLOC7456019 | Entrez gene ID : 7456019    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 1 2 1 3 3 1 1 1 2 1 1 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000470 [list] [network] maturation of LSU-rRNA  (36 genes)  IEA  
GO:0000460 [list] [network] maturation of 5.8S rRNA  (40 genes)  IEA  
GO CC
GO:0030687 [list] [network] preribosome, large subunit precursor  (36 genes)  IEA  
GO MF
Protein XP_002320535.1 [sequence] [blastp]
XP_052302697.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_002320535.1)
nucl 10  (predict for XP_052302697.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002320535.1)
other 9  (predict for XP_052302697.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7456019
ppo-u.5
for
7456019
ppo-m.4
for
7456019
gma-u.5
for
100817676
gma-u.5
for
100780091
mtr-u.5
for
120579661
ath-u.5
for
AT5G48240
bra-r.6
for
103874938
bra-r.6
for
103837243
vvi-u.5
for
100249313
ghi-r.1
for
107955303
ghi-r.1
for
107912474
ghi-r.1
for
107954735
bna-r.1
for
106365821
bna-r.1
for
111197885
bna-r.1
for
106428099
cit-r.1
for
102630811
sly-u.5
for
101255093
sot-r.1
for
102587408
nta-r.1
for
107784302
nta-r.1
for
107771274
osa-u.5
for
4350250
zma-u.5
for
100280074
tae-r.2
for
123109047
tae-r.2
for
123180273
tae-r.2
for
123189482
hvu-r.1
for
123412014
sbi-r.1
for
8081596
bdi-r.1
for
100835705


Ortholog ID: 7755
Species ppo gma gma mtr ath bra bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC7456019 LOC100817676 LOC100780091 LOC120579661 AT5G48240 LOC103874938 LOC103837243 LOC100249313 LOC107955303 LOC107912474 LOC107954735 LOC106365821 LOC111197885 LOC106348975 LOC102630811 LOC101255093 LOC102587408 LOC107784302 LOC107771274 LOC4350250 LOC100280074 LOC123109047 LOC123180273 LOC123189482 LOC123412014 LOC8081596 LOC100835705
Function* uncharacterized LOC7456019 RRP15-like protein RRP15-like protein-like RRP15-like protein Rrp15p protein RRP15-like protein RRP15-like protein uncharacterized LOC100249313 RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein uncharacterized LOC102630811 uncharacterized LOC101255093 RRP15-like protein uncharacterized LOC107784302 uncharacterized LOC107771274 uncharacterized LOC4350250 uncharacterized LOC100280074 RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein RRP15-like protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi03010 Ribosome 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7456019 100817676 100780091 120579661 834877 103874938 103837243 100249313 107955303 107912474 107954735 106365821 111197885 106348975 102630811 101255093 102587408 107784302 107771274 4350250 100280074 123109047 123180273 123189482 123412014 8081596 100835705
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