ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	7456369	uncharacterized LOC7456369
ppo-u.5	7456369	uncharacterized LOC7456369
ppo-m.4	7456369	uncharacterized LOC7456369
gma-u.5	100790628	uncharacterized LOC100790628
gma-u.5	100527741	uncharacterized LOC100527741
mtr-u.5	11441919	sigma intracellular receptor 2
ath-u.5	AT2G32380	Transmembrane protein 97, Putative
ath-u.5	AT1G05210	Transmembrane protein 97, Putative
bra-r.6	103836537	sigma intracellular receptor 2
bra-r.6	103844158	uncharacterized LOC103844158
vvi-u.5	100258497	uncharacterized LOC100258497
ghi-r.1	107946335	uncharacterized LOC107946335
ghi-r.1	107946332	sigma intracellular receptor 2
ghi-r.1	107946331	sigma intracellular receptor 2
bna-r.1	106400967	uncharacterized LOC106400967
bna-r.1	125577208	sigma intracellular receptor 2-like
bna-r.1	111205455	uncharacterized LOC111205455
cit-r.1	102612719	hypothetical protein
sly-u.5	101252004	uncharacterized LOC101252004
sly-u.5	101251697	uncharacterized LOC101251697
sot-r.1	102583523	transmembrane protein 97-like
sot-r.1	102583195	transmembrane protein 97-like
nta-r.1	107759572	uncharacterized LOC107759572
nta-r.1	107830976	uncharacterized LOC107830976
osa-u.5	4343156	uncharacterized LOC4343156
osa-u.5	9266315	uncharacterized LOC9266315
osa-u.5	4333570	uncharacterized LOC4333570
zma-u.5	100193358	uncharacterized LOC100193358
hvu-r.1	123442854	sigma intracellular receptor 2-like
hvu-r.1	123452699	sigma intracellular receptor 2-like
sbi-r.1	8057910	transmembrane protein 97
bdi-r.1	100828036	sigma intracellular receptor 2
cre-r.1	CHLRE_01g050000v5	uncharacterized protein

Top 50 coexpressed genes to 7456369 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7456369 (ppo-r.4 coexpression data)

CoexMap"7456369"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005783 [list] [network] endoplasmic reticulum

(618 genes)

IEA

GO MF

Protein

XP_002313041.3 [sequence] [blastp]

Subcellular
localization
wolf

vacu 5, plas 1, E.R. 1, E.R._plas 1

(predict for XP_002313041.3)

Subcellular
localization
TargetP

scret 9

(predict for XP_002313041.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7456369	ppo-u.5 for 7456369	ppo-m.4 for 7456369	gma-u.5 for 100790628	gma-u.5 for 100527741	mtr-u.5 for 11441919	ath-u.5 for AT2G32380	ath-u.5 for AT1G05210	bra-r.6 for 103836537	bra-r.6 for 103844158	vvi-u.5 for 100258497	ghi-r.1 for 107946335	ghi-r.1 for 107946332	ghi-r.1 for 107946331	bna-r.1 for 106400967	bna-r.1 for 125577208	bna-r.1 for 111205455	cit-r.1 for 102612719	sly-u.5 for 101252004	sly-u.5 for 101251697	sot-r.1 for 102583523	sot-r.1 for 102583195	nta-r.1 for 107759572	nta-r.1 for 107830976	osa-u.5 for 4343156	osa-u.5 for 9266315	osa-u.5 for 4333570	zma-u.5 for 100193358	hvu-r.1 for 123442854	hvu-r.1 for 123452699	sbi-r.1 for 8057910	bdi-r.1 for 100828036	cre-r.1 for CHLRE_01g050000v5

Ortholog

Ortholog ID: 2991

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC7456369

uncharacterized LOC100790628

uncharacterized LOC100527741

sigma intracellular receptor 2

Transmembrane protein 97, Putative

sigma intracellular receptor 2

uncharacterized LOC103844158

uncharacterized LOC100258497

uncharacterized LOC107937858

uncharacterized LOC107937855

sigma intracellular receptor 2

uncharacterized LOC106400967

uncharacterized LOC111205455

uncharacterized LOC106371078

hypothetical protein

uncharacterized LOC101252004

uncharacterized LOC101251697

transmembrane protein 97-like

uncharacterized LOC107759572

uncharacterized LOC107830976

uncharacterized LOC4343156

uncharacterized LOC9266315

uncharacterized LOC4333570

uncharacterized LOC100193358

sigma intracellular receptor 2

sigma intracellular receptor 2-like

transmembrane protein 97

sigma intracellular receptor 2

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	10
gma04145	Phagosome	5
gma03060	Protein export	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04141	Protein processing in endoplasmic reticulum	9
gma04145	Phagosome	4
gma03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	3
ath00330	Arginine and proline metabolism	2
ath04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00500	Starch and sucrose metabolism	2
ath00900	Terpenoid backbone biosynthesis	2
ath00510	N-Glycan biosynthesis	2
ath00513	Various types of N-glycan biosynthesis	2
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi00220	Arginine biosynthesis	2
vvi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2
ghi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00511	Other glycan degradation	2
bna00513	Various types of N-glycan biosynthesis	2
bna00520	Amino sugar and nucleotide sugar metabolism	2
bna00531	Glycosaminoglycan degradation	2
bna00600	Sphingolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00670	One carbon pool by folate	3
cit01200	Carbon metabolism	3
cit04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00100	Steroid biosynthesis	4
sly00630	Glyoxylate and dicarboxylate metabolism	2
sly01200	Carbon metabolism	2
sly00260	Glycine, serine and threonine metabolism	2
sly00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	4
sot04814	Motor proteins	3
sot00010	Glycolysis / Gluconeogenesis	2
sot00620	Pyruvate metabolism	2
sot01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00900	Terpenoid backbone biosynthesis	4
sot00010	Glycolysis / Gluconeogenesis	3
sot00620	Pyruvate metabolism	3
sot01200	Carbon metabolism	3
sot00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01240	Biosynthesis of cofactors	2
osa00190	Oxidative phosphorylation	2
osa03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	4
osa04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00010	Glycolysis / Gluconeogenesis	2
zma00030	Pentose phosphate pathway	2
zma00051	Fructose and mannose metabolism	2
zma00510	N-Glycan biosynthesis	2
zma00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03050	Proteasome	5
hvu00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	5
sbi01250	Biosynthesis of nucleotide sugars	5
sbi00040	Pentose and glucuronate interconversions	2
sbi00053	Ascorbate and aldarate metabolism	2
sbi00541	Biosynthesis of various nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04141	Protein processing in endoplasmic reticulum	4
bdi00061	Fatty acid biosynthesis	2
bdi01212	Fatty acid metabolism	2
bdi03060	Protein export	2
bdi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04141	Protein processing in endoplasmic reticulum	3
cre00510	N-Glycan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

7456369

100790628

100527741

11441919

817799

839261

103836537

103844158

100258497

107937858

107937855

107937853

106400967

111205455

106371078

102612719

101252004

101251697

102583523

102583195

107759572

107830976

4343156

9266315

4333570

100193358

123105393

123442854

123452699

8057910

100828036

5715729

The preparation time of this page was 0.2 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	hvu	sbi	bdi	cre	tae
Paralog	3	2	1	2	2	1	3	3	1	2	2	2	3	1	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7456369 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7456369 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**