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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7456918   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7456918   ethylene-responsive transcription factor RAP2-4 
 ppo-m.4   7456918   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7495144   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7471518   ethylene-responsive transcription factor RAP2-4 
 ppo-u.5   7468904   ethylene-responsive transcription factor RAP2-13-like 
 gma-u.5   100818839   ethylene-responsive transcription factor 
 gma-u.5   100802961   ethylene-responsive transcription factor RAP2-4 
 gma-u.5   100815162   ethylene-responsive transcription factor ERF060-like 
 mtr-u.5   25489428   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   11437084   ethylene-responsive transcription factor RAP2-4 
 mtr-u.5   25501933   ethylene-responsive transcription factor ERF060 
 ath-u.5   AT2G22200   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT4G39780   Integrase-type DNA-binding superfamily protein 
 ath-u.5   AT1G22190   Integrase-type DNA-binding superfamily protein 
 bra-r.6   103830541   ethylene-responsive transcription factor RAP2-4-like 
 bra-r.6   103869071   ethylene-responsive transcription factor RAP2-13 
 bra-r.6   103864333   ethylene-responsive transcription factor ERF056 
 vvi-u.5   100261438   ethylene-responsive transcription factor RAP2-4 
 vvi-u.5   100245515   ethylene-responsive transcription factor RAP2-4 
 ghi-r.1   107898106   ethylene-responsive transcription factor ERF060-like 
 ghi-r.1   107905038   ethylene-responsive transcription factor RAP2-4 
 ghi-r.1   121214633   ethylene-responsive transcription factor RAP2-4 
 bna-r.1   106451235   ethylene-responsive transcription factor RAP2-13-like 
 bna-r.1   106368610   ethylene-responsive transcription factor ERF060-like 
 cit-r.1   102614029   ethylene-responsive transcription factor RAP2-13 
 cit-r.1   102614278   ethylene-responsive transcription factor RAP2-4-like 
 sly-u.5   ERF-H11   ethylene response factor H.11 
 sly-u.5   DREB3   dehydration-responsive element binding protein 3 
 sly-u.5   ERF-H10   ethylene response factor H.10 
 sot-r.1   102591370   ethylene-responsive transcription factor RAP2-13 
 sot-r.1   102602854   ethylene-responsive transcription factor RAP2-4 
 sot-r.1   102585333   ethylene-responsive transcription factor RAP2-13 
 nta-r.1   107819325   ethylene-responsive transcription factor RAP2-4-like 
 nta-r.1   107759638   ethylene-responsive transcription factor RAP2-13-like 
 nta-r.1   107774257   ethylene-responsive transcription factor RAP2-4-like 
 osa-u.5   4346884   ethylene-responsive transcription factor RAP2-13 
 osa-u.5   4345541   ethylene-responsive transcription factor RAP2-4 
 osa-u.5   4340525   ethylene-responsive transcription factor RAP2-13 
 zma-u.5   100502435   putative AP2/EREBP transcription factor superfamily protein 
 zma-u.5   103632654   uncharacterized LOC103632654 
 zma-u.5   103637851   ethylene-responsive transcription factor RAP2-13 
 tae-r.2   100127078   ethylene-responsive transcription factor RAP2-13 
 tae-r.2   123128343   ethylene-responsive transcription factor RAP2-4 
 tae-r.2   123145449   ethylene-responsive transcription factor RAP2-4 
 hvu-r.1   123412187   ethylene-responsive transcription factor RAP2-13-like 
 hvu-r.1   123402980   ethylene-responsive transcription factor RAP2-4-like 
 hvu-r.1   123395344   ethylene-responsive transcription factor RAP2-13 
 sbi-r.1   8066410   ethylene-responsive transcription factor ERF060 
 sbi-r.1   8065368   ethylene-responsive transcription factor RAP2-4 
 sbi-r.1   8073540   ethylene-responsive transcription factor ERF060 
 bdi-r.1   100825824   ethylene-responsive transcription factor RAP2-4 
 bdi-r.1   100836054   ethylene-responsive transcription factor RAP2-13 
 bdi-r.1   100838838   ethylene-responsive transcription factor RAP2-13 

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Top 50 coexpressed genes to 7456918 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7456918 (ppo-r.4 coexpression data)

CoexMap"7456918"


ppoLOC7456918 | Entrez gene ID : 7456918    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 3 3 3 3 2 3 2 2 3 3 3 3 3 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1948 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1363 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (2205 genes)  IEA  
Protein XP_002310574.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for XP_002310574.4)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_002310574.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7456918
ppo-u.5
for
7456918
ppo-m.4
for
7456918
ppo-u.5
for
7495144
ppo-u.5
for
7471518
ppo-u.5
for
7468904
gma-u.5
for
100818839
gma-u.5
for
100802961
gma-u.5
for
100815162
mtr-u.5
for
25489428
mtr-u.5
for
11437084
mtr-u.5
for
25501933
ath-u.5
for
AT2G22200
ath-u.5
for
AT4G39780
ath-u.5
for
AT1G22190
bra-r.6
for
103830541
bra-r.6
for
103869071
bra-r.6
for
103864333
vvi-u.5
for
100261438
vvi-u.5
for
100245515
ghi-r.1
for
107898106
ghi-r.1
for
107905038
ghi-r.1
for
121214633
bna-r.1
for
106451235
bna-r.1
for
106368610
cit-r.1
for
102614029
cit-r.1
for
102614278
sly-u.5
for
ERF-H11
sly-u.5
for
DREB3
sly-u.5
for
ERF-H10
sot-r.1
for
102591370
sot-r.1
for
102602854
sot-r.1
for
102585333
nta-r.1
for
107819325
nta-r.1
for
107759638
nta-r.1
for
107774257
osa-u.5
for
4346884
osa-u.5
for
4345541
osa-u.5
for
4340525
zma-u.5
for
100502435
zma-u.5
for
103632654
zma-u.5
for
103637851
tae-r.2
for
100127078
tae-r.2
for
123128343
tae-r.2
for
123145449
hvu-r.1
for
123412187
hvu-r.1
for
123402980
hvu-r.1
for
123395344
sbi-r.1
for
8066410
sbi-r.1
for
8065368
sbi-r.1
for
8073540
bdi-r.1
for
100825824
bdi-r.1
for
100836054
bdi-r.1
for
100838838


Ortholog ID: 914
Species ppo ppo ppo gma gma gma mtr mtr mtr ath ath ath bra bra bra vvi vvi ghi ghi ghi bna bna cit cit sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi
Symbol LOC7456918 LOC7471518 LOC7468904 LOC100815162 LOC106796800 DREB3 LOC25489428 LOC11437084 LOC25501933 AT2G22200 AT1G22190 RAP2.4 LOC103830541 LOC103864333 LOC103853108 LOC100261438 LOC100245515 LOC107905038 LOC107962440 LOC107950470 LOC106430468 LOC106402048 LOC102614029 LOC102614278 ERF-H11 DREB3 ERF-H10 LOC102591370 LOC102602854 LOC102585333 LOC107819325 LOC107759638 LOC107774257 LOC4346884 LOC4340525 LOC4330752 LOC103632654 LOC103637851 LOC542569 LOC123128343 LOC123159838 LOC123166284 LOC123412187 LOC123402980 LOC123395344 LOC8066410 LOC8065368 LOC8073540 LOC100836054 LOC100838838 LOC100839894
Function* ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor ERF060-like ethylene-responsive transcription factor ERF060 dehydration responsive element-binding protein 3 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 Integrase-type DNA-binding superfamily protein Integrase-type DNA-binding superfamily protein uncharacterized protein ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor ERF056 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor ERF060-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene response factor H.11 dehydration-responsive element binding protein 3 ethylene response factor H.10 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4 uncharacterized LOC103632654 ethylene-responsive transcription factor RAP2-13 uncharacterized LOC542569 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13-like ethylene-responsive transcription factor RAP2-4-like ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-4 ethylene-responsive transcription factor ERF060 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-13 ethylene-responsive transcription factor RAP2-4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 3
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00220 Arginine biosynthesis 2
bna00250 Alanine, aspartate and glutamate metabolism 2
bna00630 Glyoxylate and dicarboxylate metabolism 2
bna00910 Nitrogen metabolism 2
bna01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot00710 Carbon fixation by Calvin cycle 2
sot01200 Carbon metabolism 2
sot01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01240 Biosynthesis of cofactors 4
nta01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 4
hvu04016 MAPK signaling pathway - plant 3
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7456918 7471518 7468904 100815162 106796800 732559 25489428 11437084 25501933 816754 838824 844143 103830541 103864333 103853108 100261438 100245515 107905038 107962440 107950470 106430468 106402048 102614029 102614278 101250096 543714 101264209 102591370 102602854 102585333 107819325 107759638 107774257 4346884 4340525 4330752 103632654 103637851 542569 123128343 123159838 123166284 123412187 123402980 123395344 8066410 8065368 8073540 100836054 100838838 100839894
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