ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-r.4	7458998	uncharacterized LOC7458998
ppo-u.5	7458998	uncharacterized LOC7458998
ppo-m.4	7458998	uncharacterized LOC7458998
ppo-u.5	7471561	uncharacterized LOC7471561
gma-u.5	100808809	death-inducer obliterator 1
gma-u.5	100791982	uncharacterized LOC100791982
mtr-u.5	11425857	uncharacterized LOC11425857
ath-u.5	AT2G25640	SPOC domain / Transcription elongation factor S-II protein
ath-u.5	AT5G11430	SPOC domain / Transcription elongation factor S-II protein
ath-u.5	AT5G25520	SPOC domain / Transcription elongation factor S-II protein
bra-r.6	103864683	uncharacterized LOC103864683
bra-r.6	103874412	SPOC domain-containing protein 1
vvi-u.5	100267937	uncharacterized LOC100267937
ghi-r.1	107942483	uncharacterized LOC107942483
ghi-r.1	107909201	uncharacterized LOC107909201
ghi-r.1	107907306	uncharacterized LOC107907306
bna-r.1	106366797	uncharacterized LOC106366797
bna-r.1	106446815	uncharacterized LOC106446815
bna-r.1	106424574	uncharacterized LOC106424574
cit-r.1	102629288	hypothetical protein
sly-u.5	101249111	uncharacterized LOC101249111
sot-r.1	102580101	death-inducer obliterator 1-like
nta-r.1	107817439	uncharacterized LOC107817439
nta-r.1	107810211	uncharacterized LOC107810211
osa-u.5	4341430	uncharacterized LOC4341430
osa-u.5	4328690	uncharacterized LOC4328690
zma-u.5	103649038	uncharacterized LOC103649038
zma-u.5	100501569	putative SPOC domain / Transcription elongation factor S-II protein
zma-u.5	103627127	death-inducer obliterator 1-like
tae-r.2	123148131	uncharacterized LOC123148131
tae-r.2	123143278	death-inducer obliterator 1
hvu-r.1	123406265	death-inducer obliterator 1
sbi-r.1	8082942	death-inducer obliterator 1
bdi-r.1	100836963	death-inducer obliterator 1

Annotation

functional annotation

KEGG

GO BP

GO:0006351 [list] [network] DNA-templated transcription

(264 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(3662 genes)

IEA

GO MF

Protein

XP_002324832.3 [sequence] [blastp]
XP_024446392.2 [sequence] [blastp]
XP_024446393.2 [sequence] [blastp]
XP_024446394.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 8, cyto_nucl 4, extr 1, E.R. 1	(predict for XP_002324832.3)
nucl 8, cyto_nucl 4, extr 1, E.R. 1	(predict for XP_024446392.2)
nucl 8, cyto_nucl 4, extr 1, E.R. 1	(predict for XP_024446393.2)
nucl 8, cyto_nucl 4, extr 1, E.R. 1	(predict for XP_024446394.2)

Subcellular
localization
TargetP

other 5	(predict for XP_002324832.3)
other 5	(predict for XP_024446392.2)
other 5	(predict for XP_024446393.2)
other 5	(predict for XP_024446394.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7458998	ppo-u.5 for 7458998	ppo-m.4 for 7458998	ppo-u.5 for 7471561	gma-u.5 for 100808809	gma-u.5 for 100791982	mtr-u.5 for 11425857	ath-u.5 for AT2G25640	ath-u.5 for AT5G11430	ath-u.5 for AT5G25520	bra-r.6 for 103864683	bra-r.6 for 103874412	vvi-u.5 for 100267937	ghi-r.1 for 107942483	ghi-r.1 for 107909201	ghi-r.1 for 107907306	bna-r.1 for 106366797	bna-r.1 for 106446815	bna-r.1 for 106424574	cit-r.1 for 102629288	sly-u.5 for 101249111	sot-r.1 for 102580101	nta-r.1 for 107817439	nta-r.1 for 107810211	osa-u.5 for 4341430	osa-u.5 for 4328690	zma-u.5 for 103649038	zma-u.5 for 100501569	zma-u.5 for 103627127	tae-r.2 for 123148131	tae-r.2 for 123143278	hvu-r.1 for 123406265	sbi-r.1 for 8082942	bdi-r.1 for 100836963

Ortholog

Ortholog ID: 4873

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC7458998

uncharacterized LOC7471561

death-inducer obliterator 1

uncharacterized LOC100791982

uncharacterized LOC11425857

SPOC domain / Transcription elongation factor S-II protein

uncharacterized LOC103864683

SPOC domain-containing protein 1

uncharacterized LOC100267937

uncharacterized LOC107942483

uncharacterized LOC107909201

uncharacterized LOC107902842

uncharacterized LOC106366797

uncharacterized LOC106391139

uncharacterized LOC106372406

hypothetical protein

uncharacterized LOC101249111

death-inducer obliterator 1-like

uncharacterized LOC107817439

uncharacterized LOC107810211

uncharacterized LOC4341430

uncharacterized LOC4328690

uncharacterized LOC103649038

putative SPOC domain / Transcription elongation factor S-II protein

death-inducer obliterator 1-like

uncharacterized LOC123148131

death-inducer obliterator 1

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03250	Viral life cycle - HIV-1	2
gma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	3
gma04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	3
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	2
ath03015	mRNA surveillance pathway	2
ath03083	Polycomb repressive complex	2
ath03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03015	mRNA surveillance pathway	2
ghi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	2
bna04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03022	Basal transcription factors	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	2
sot03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04120	Ubiquitin mediated proteolysis	2

Expression

Expression pattern

Entrez Gene ID^*

7458998

7471561

100808809

100791982

11425857

817105

831014

832627

103864683

103874412

100267937

107942483

107909201

107902842

106366797

106391139

106372406

102629288

101249111

102580101

107817439

107810211

4341430

4328690

103649038

100501569

103627127

123148131

123143278

123131813

123406265

8082942

100836963

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7458998 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7458998 (ppo-r.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	3	2	1	3	3	1	1	1	2	2	3	2	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7458998 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7458998 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**