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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7461229   uncharacterized LOC7461229 
 ppo-u.5   7461229   uncharacterized LOC7461229 
 ppo-m.4   7461229   uncharacterized LOC7461229 
 ppo-u.5   7456366   uncharacterized LOC7456366 
 gma-u.5   100784228   uncharacterized LOC100784228 
 gma-u.5   100795495   F-box protein At2g16365 
 mtr-u.5   11417143   uncharacterized LOC11417143 
 ath-u.5   AT2G16365   F-box family protein 
 ath-u.5   AT4G34550   F-box protein 
 bra-r.6   103860448   F-box protein At2g16365 
 bra-r.6   103846044   F-box protein At2g16365 
 vvi-u.5   100243604   uncharacterized LOC100243604 
 ghi-r.1   107945030   uncharacterized LOC107945030 
 ghi-r.1   107928803   uncharacterized LOC107928803 
 bna-r.1   106439849   F-box protein At2g16365-like 
 bna-r.1   106433684   F-box protein At2g16365 
 bna-r.1   106410776   F-box protein At2g16365 
 cit-r.1   102628277   uncharacterized LOC102628277 
 sly-u.5   101251228   uncharacterized LOC101251228 
 sly-u.5   101263256   F-box protein At2g16365 
 sot-r.1   102591212   uncharacterized LOC102591212 
 sot-r.1   102584744   F-box protein At2g16365-like 
 nta-r.1   107762693   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 
 nta-r.1   107768020   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 
 nta-r.1   107785806   protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 

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Top 50 coexpressed genes to 7461229 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7461229 (ppo-r.4 coexpression data)

CoexMap"7461229"


ppoLOC7461229 | Entrez gene ID : 7461229    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta cre hvu tae bdi osa zma sbi
Paralog 4 2 1 2 2 1 2 3 1 2 2 3 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010099 [list] [network] regulation of photomorphogenesis  (8 genes)  IEA  
GO CC
GO MF
Protein XP_024455239.2 [sequence] [blastp]
XP_024455240.2 [sequence] [blastp]
XP_024455241.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_024455239.2)
nucl 9  (predict for XP_024455240.2)
nucl 9  (predict for XP_024455241.2)
Subcellular
localization
TargetP
other 8  (predict for XP_024455239.2)
other 8  (predict for XP_024455240.2)
other 8  (predict for XP_024455241.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7461229
ppo-u.5
for
7461229
ppo-m.4
for
7461229
ppo-u.5
for
7456366
gma-u.5
for
100784228
gma-u.5
for
100795495
mtr-u.5
for
11417143
ath-u.5
for
AT2G16365
ath-u.5
for
AT4G34550
bra-r.6
for
103860448
bra-r.6
for
103846044
vvi-u.5
for
100243604
ghi-r.1
for
107945030
ghi-r.1
for
107928803
bna-r.1
for
106439849
bna-r.1
for
106433684
bna-r.1
for
106410776
cit-r.1
for
102628277
sly-u.5
for
101251228
sly-u.5
for
101263256
sot-r.1
for
102591212
sot-r.1
for
102584744
nta-r.1
for
107762693
nta-r.1
for
107768020
nta-r.1
for
107785806


Ortholog ID: 8873
Species ppo ppo gma gma mtr ath ath bra bra vvi ghi ghi bna bna bna cit sly sly sot sot nta nta nta
Symbol LOC7461229 LOC7456366 LOC100784228 LOC100795495 LOC11417143 AT2G16365 AT4G34550 LOC103860448 LOC103846044 LOC100243604 LOC107945030 LOC107928803 LOC106433684 LOC106410776 LOC106406028 LOC102628277 LOC101251228 LOC101263256 LOC102591212 LOC102584744 LOC107762693 LOC107785806 LOC107808647
Function* uncharacterized LOC7461229 uncharacterized LOC7456366 uncharacterized LOC100784228 F-box protein At2g16365 uncharacterized LOC11417143 F-box family protein F-box protein F-box protein At2g16365 F-box protein At2g16365 uncharacterized LOC100243604 uncharacterized LOC107945030 uncharacterized LOC107928803 F-box protein At2g16365 F-box protein At2g16365 F-box protein At2g16365 uncharacterized LOC102628277 uncharacterized LOC101251228 F-box protein At2g16365 uncharacterized LOC102591212 F-box protein At2g16365-like protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1 protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly04075 Plant hormone signal transduction 2
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7461229 7456366 100784228 100795495 11417143 816133 829606 103860448 103846044 100243604 107945030 107928803 106433684 106410776 106406028 102628277 101251228 101263256 102591212 102584744 107762693 107785806 107808647
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