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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7462316   PRA1 family protein H 
 ppo-u.5   7462316   PRA1 family protein H 
 ppo-u.5   18095548   PRA1 family protein H 
 gma-u.5   100812581   PRA1 family protein H 
 mtr-u.5   25487299   PRA1 family protein H 
 ath-u.5   PRA1.H   prenylated RAB acceptor 1.H 
 bra-r.6   103867262   PRA1 family protein H 
 vvi-u.5   100253837   PRA1 family protein H 
 ghi-r.1   107948761   PRA1 family protein H 
 ghi-r.1   107916886   PRA1 family protein H 
 bna-r.1   106375963   PRA1 family protein H-like 
 bna-r.1   106376114   PRA1 family protein H 
 sly-u.5   101251955   PRA1 family protein H 
 sot-r.1   102585190   PRA1 family protein H 
 nta-r.1   107809886   PRA1 family protein H-like 
 nta-r.1   107767169   PRA1 family protein H 
 osa-u.5   4346463   PRA1 family protein H 
 zma-u.5   100274877   PRA1 family protein H 
 zma-u.5   100272513   PRA1 family protein H 
 tae-r.2   123120784   PRA1 family protein H 
 tae-r.2   123111527   PRA1 family protein H 
 tae-r.2   123103335   PRA1 family protein H 
 hvu-r.1   123398085   PRA1 family protein H 
 sbi-r.1   8057505   PRA1 family protein H 
 bdi-r.1   104584412   PRA1 family protein H 

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Top 50 coexpressed genes to 7462316 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7462316 (ppo-r.4 coexpression data)

CoexMap"7462316"


ppoLOC7462316 | Entrez gene ID : 7462316    
Species ppo gma mtr ath bra vvi ghi bna sly sot nta osa zma tae hvu sbi bdi cre cit
Paralog 3 1 1 1 1 1 2 2 1 1 2 1 2 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016192 [list] [network] vesicle-mediated transport  (540 genes)  IEA  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (593 genes)  IEA  
GO:0005783 [list] [network] endoplasmic reticulum  (618 genes)  IEA  
GO MF
Protein XP_002316885.1 [sequence] [blastp]
XP_024436648.1 [sequence] [blastp]
XP_024436649.1 [sequence] [blastp]
XP_052301118.1 [sequence] [blastp]
XP_052301119.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 5,  plas 2,  extr 1,  golg_plas 1,  E.R._plas 1  (predict for XP_002316885.1)
vacu 5,  plas 2,  extr 1,  golg_plas 1,  E.R._plas 1  (predict for XP_024436648.1)
vacu 6,  plas 2,  extr 1,  E.R._plas 1  (predict for XP_024436649.1)
plas 4,  nucl 2,  golg_plas 2,  extr 1,  E.R. 1  (predict for XP_052301118.1)
vacu 6,  plas 1,  extr 1,  E.R. 1,  golg 1,  nucl_plas 1,  cysk_plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_052301119.1)
Subcellular
localization
TargetP
other 6  (predict for XP_002316885.1)
other 6  (predict for XP_024436648.1)
other 6  (predict for XP_024436649.1)
other 6  (predict for XP_052301118.1)
other 6  (predict for XP_052301119.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7462316
ppo-u.5
for
7462316
ppo-u.5
for
18095548
gma-u.5
for
100812581
mtr-u.5
for
25487299
ath-u.5
for
PRA1.H
bra-r.6
for
103867262
vvi-u.5
for
100253837
ghi-r.1
for
107948761
ghi-r.1
for
107916886
bna-r.1
for
106375963
bna-r.1
for
106376114
sly-u.5
for
101251955
sot-r.1
for
102585190
nta-r.1
for
107809886
nta-r.1
for
107767169
osa-u.5
for
4346463
zma-u.5
for
100274877
zma-u.5
for
100272513
tae-r.2
for
123120784
tae-r.2
for
123111527
tae-r.2
for
123103335
hvu-r.1
for
123398085
sbi-r.1
for
8057505
bdi-r.1
for
104584412


Ortholog ID: 10224
Species ppo ppo gma mtr ath bra vvi ghi ghi bna bna sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC7462316 LOC18095548 LOC100812581 LOC25487299 PRA1.H LOC103867262 LOC100253837 LOC107948761 LOC107916886 LOC106375963 LOC106376114 LOC101251955 LOC102585190 LOC107809886 LOC107767169 LOC4346463 LOC100274877 LOC100272513 LOC123120784 LOC123111527 LOC123103335 LOC123398085 LOC8057505 LOC104584412
Function* PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H prenylated RAB acceptor 1.H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H-like PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H-like PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H PRA1 family protein H
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00460 Cyanoamino acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00260 Glycine, serine and threonine metabolism 4
ghi00460 Cyanoamino acid metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 4
ghi00670 One carbon pool by folate 4
ghi01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 3
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00750 Vitamin B6 metabolism 2
bdi01240 Biosynthesis of cofactors 2
bdi00061 Fatty acid biosynthesis 2
bdi00062 Fatty acid elongation 2
bdi01212 Fatty acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7462316 18095548 100812581 25487299 828863 103867262 100253837 107948761 107916886 106375963 106376114 101251955 102585190 107809886 107767169 4346463 100274877 100272513 123120784 123111527 123103335 123398085 8057505 104584412
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