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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7463581   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7463581   transcription initiation factor TFIID subunit 7 
 ppo-m.4   7463581   transcription initiation factor TFIID subunit 7 
 ppo-u.5   7457707   transcription initiation factor TFIID subunit 7 
 gma-u.5   100810740   transcription initiation factor TFIID subunit 7 
 gma-u.5   100806004   transcription initiation factor TFIID subunit 7-like 
 gma-u.5   100781772   transcription initiation factor TFIID subunit 7 
 mtr-u.5   11433231   transcription initiation factor TFIID subunit 7 
 ath-u.5   TAF7   TBP-associated factor 7 
 vvi-u.5   100258782   transcription initiation factor TFIID subunit 7 
 sly-u.5   101261021   transcription initiation factor TFIID subunit 7 
 osa-u.5   4338489   transcription initiation factor TFIID subunit 7 
 zma-u.5   103644121   transcription initiation factor TFIID subunit 7 
 zma-u.5   103627946   transcription initiation factor TFIID subunit 7 
 zma-u.5   100193879   Transcription initiation factor TFIID subunit 7 

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Top 50 coexpressed genes to 7463581 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7463581 (ppo-r.4 coexpression data)

CoexMap"7463581"


ppoLOC7463581 | Entrez gene ID : 7463581    
Species ppo gma mtr ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 3 1 1 1 1 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG pop03022 [list] [network] Basal transcription factors (55 genes)
GO BP
GO:0051123 [list] [network] RNA polymerase II preinitiation complex assembly  (12 genes)  IEA  
GO:0006367 [list] [network] transcription initiation at RNA polymerase II promoter  (36 genes)  IEA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (22 genes)  IEA  
GO MF
GO:0016251 [list] [network] RNA polymerase II general transcription initiation factor activity  (18 genes)  IEA  
Protein XP_006386053.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 2,  cysk 1,  cyto_plas 1  (predict for XP_006386053.1)
Subcellular
localization
TargetP
other 7  (predict for XP_006386053.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7463581
ppo-u.5
for
7463581
ppo-m.4
for
7463581
ppo-u.5
for
7457707
gma-u.5
for
100810740
gma-u.5
for
100806004
gma-u.5
for
100781772
mtr-u.5
for
11433231
ath-u.5
for
TAF7
vvi-u.5
for
100258782
sly-u.5
for
101261021
osa-u.5
for
4338489
zma-u.5
for
103644121
zma-u.5
for
103627946
zma-u.5
for
100193879


Ortholog ID: 4472
Species ppo ppo gma gma mtr ath bra bra vvi ghi ghi bna bna cit sly sot sot nta nta osa zma zma tae tae hvu hvu sbi sbi bdi cre
Symbol LOC7463581 LOC7457707 LOC100806004 LOC100781772 LOC11433231 TAF7 LOC103829794 LOC103871047 LOC100258782 LOC121220148 LOC107938391 LOC125601103 LOC106350974 LOC102614199 LOC101261021 LOC102594176 LOC107057648 LOC107808629 LOC107774462 LOC4338489 LOC103640335 LOC100193879 LOC123074579 LOC123070228 LOC123443979 LOC123409804 LOC8077195 LOC8054955 LOC100831039 CHLRE_01g011200v5
Function* transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 TBP-associated factor 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 Transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7-like transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 transcription initiation factor TFIID subunit 7 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
ppo03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03020 RNA polymerase 2
bra03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 4
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna03022 Basal transcription factors 3
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03040 Spliceosome 2
cit03083 Polycomb repressive complex 2
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 3
sly03420 Nucleotide excision repair 3
sly03040 Spliceosome 2
sly03022 Basal transcription factors 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 3
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 4
sot03040 Spliceosome 4
sot03018 RNA degradation 3
sot03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 4
zma04136 Autophagy - other 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00511 Other glycan degradation 3
tae04142 Lysosome 3
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 4
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
hvu00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00600 Sphingolipid metabolism 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04145 Phagosome 4
bdi00190 Oxidative phosphorylation 3
bdi04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7463581 7457707 100806004 100781772 11433231 841975 103829794 103871047 100258782 121220148 107938391 125601103 106350974 102614199 101261021 102594176 107057648 107808629 107774462 4338489 103640335 100193879 123074579 123070228 123443979 123409804 8077195 8054955 100831039 5715027
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