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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4   7468139   protein BIG GRAIN 1-like E 
 ppo-u.5   7468139   protein BIG GRAIN 1-like E 
 ppo-u.5   7498221   protein BIG GRAIN 1-like E 
 gma-u.5   100798968   protein BIG GRAIN 1-like E 
 gma-u.5   100775233   protein BIG GRAIN 1-like E 
 mtr-u.5   11436423   protein BIG GRAIN 1-like E 
 ath-u.5   AT1G69160   suppressor 
 bra-r.6   103831317   protein BIG GRAIN 1-like E 
 vvi-u.5   100266436   protein BIG GRAIN 1-like E 
 ghi-r.1   107893806   protein BIG GRAIN 1-like E 
 ghi-r.1   107918799   protein BIG GRAIN 1-like E 
 ghi-r.1   107934742   protein BIG GRAIN 1-like E 
 bna-r.1   106420469   protein BIG GRAIN 1-like E 
 bna-r.1   106403315   protein BIG GRAIN 1-like E 
 bna-r.1   106357185   protein BIG GRAIN 1-like E 
 cit-r.1   102619821   protein BIG GRAIN 1-like E 
 sly-u.5   101262309   protein BIG GRAIN 1-like E 
 sot-r.1   102588029   protein BIG GRAIN 1-like E 
 nta-r.1   107778037   protein BIG GRAIN 1-like E 
 nta-r.1   107766508   protein BIG GRAIN 1-like E 

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Top 50 coexpressed genes to 7468139 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7468139 (ppo-r.4 coexpression data)

CoexMap"7468139"


ppoLOC7468139 | Entrez gene ID : 7468139    
Species ppo gma mtr ath bra vvi ghi bna cit sly sot nta sbi osa tae hvu zma cre bdi
Paralog 3 2 1 1 1 1 3 3 1 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009734 [list] [network] auxin-activated signaling pathway  (29 genes)  IEA  
GO CC
GO MF
Protein XP_002314995.4 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_002314995.4)
Subcellular
localization
TargetP
other 7  (predict for XP_002314995.4)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-r.4
for
7468139
ppo-u.5
for
7468139
ppo-u.5
for
7498221
gma-u.5
for
100798968
gma-u.5
for
100775233
mtr-u.5
for
11436423
ath-u.5
for
AT1G69160
bra-r.6
for
103831317
vvi-u.5
for
100266436
ghi-r.1
for
107893806
ghi-r.1
for
107918799
ghi-r.1
for
107934742
bna-r.1
for
106420469
bna-r.1
for
106403315
bna-r.1
for
106357185
cit-r.1
for
102619821
sly-u.5
for
101262309
sot-r.1
for
102588029
nta-r.1
for
107778037
nta-r.1
for
107766508


Ortholog ID: 11112
Species ppo ppo gma gma mtr ath bra vvi ghi ghi ghi bna bna bna cit sly sot nta nta
Symbol LOC7468139 LOC7498221 LOC100798968 LOC100775233 LOC11436423 AT1G69160 LOC103831317 LOC100266436 LOC107893806 LOC107934742 LOC107887398 LOC106403315 LOC106357185 LOC111202902 LOC102619821 LOC101262309 LOC102588029 LOC107778037 LOC107766508
Function* protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E suppressor protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E protein BIG GRAIN 1-like E
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00270 Cysteine and methionine metabolism 6
ghi00670 One carbon pool by folate 6
ghi00999 Biosynthesis of various plant secondary metabolites 6
ghi01230 Biosynthesis of amino acids 6
ghi01240 Biosynthesis of cofactors 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00902 Monoterpenoid biosynthesis 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 4
nta04981 Folate transport and metabolism 4
nta00592 alpha-Linolenic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00592 alpha-Linolenic acid metabolism 3
nta02010 ABC transporters 2
nta04981 Folate transport and metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7468139 7498221 100798968 100775233 11436423 843247 103831317 100266436 107893806 107934742 107887398 106403315 106357185 111202902 102619821 101262309 102588029 107778037 107766508
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