ATTED-II : GeneCoexpression result

Species	Gene	Description
ppo-r.4	7468639	uncharacterized LOC7468639
ppo-u.5	7468639	uncharacterized LOC7468639
ppo-m.4	7468639	uncharacterized LOC7468639
ppo-u.5	7459885	uncharacterized LOC7459885
ppo-u.5	7465389	uncharacterized LOC7465389
ppo-u.5	7474686	uncharacterized LOC7474686
gma-u.5	100806760	uncharacterized LOC100806760
gma-u.5	100798900	uncharacterized LOC100798900
gma-u.5	100791147	uncharacterized LOC100791147
mtr-u.5	11438797	uncharacterized LOC11438797
ath-u.5	AT3G24150	uncharacterized protein
ath-u.5	AT4G32295	histone acetyltransferase
bra-r.6	103862117	uncharacterized LOC103862117
bra-r.6	103851128	uncharacterized LOC103851128
bra-r.6	103832004	uncharacterized LOC103832004
vvi-u.5	100250879	uncharacterized LOC100250879
vvi-u.5	100266444	uncharacterized LOC100266444
ghi-r.1	107906875	uncharacterized LOC107906875
ghi-r.1	107953779	uncharacterized LOC107953779
ghi-r.1	107958950	uncharacterized LOC107958950
bna-r.1	106407482	uncharacterized LOC106407482
bna-r.1	BNAA07G05990D	uncharacterized BNAA07G05990D
bna-r.1	111204068	uncharacterized LOC111204068
cit-r.1	102623950	uncharacterized LOC102623950
cit-r.1	102614540	hypothetical protein
sly-u.5	101245669	uncharacterized LOC101245669
sot-r.1	102603247	uncharacterized LOC102603247
sot-r.1	102581466	uncharacterized LOC102581466
nta-r.1	107829471	uncharacterized LOC107829471
nta-r.1	107827855	uncharacterized LOC107827855
nta-r.1	107827567	uncharacterized LOC107827567

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1948 genes)

IEA

GO CC

GO MF

GO:0003712 [list] [network] transcription coregulator activity

(154 genes)

IEA

Protein

XP_002309630.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, mito 1, plas 1, mito_plas 1

(predict for XP_002309630.1)

Subcellular
localization
TargetP

mito 7, other 3

(predict for XP_002309630.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7468639	ppo-u.5 for 7468639	ppo-m.4 for 7468639	ppo-u.5 for 7459885	ppo-u.5 for 7465389	ppo-u.5 for 7474686	gma-u.5 for 100806760	gma-u.5 for 100798900	gma-u.5 for 100791147	mtr-u.5 for 11438797	ath-u.5 for AT3G24150	ath-u.5 for AT4G32295	bra-r.6 for 103862117	bra-r.6 for 103851128	bra-r.6 for 103832004	vvi-u.5 for 100250879	vvi-u.5 for 100266444	ghi-r.1 for 107906875	ghi-r.1 for 107953779	ghi-r.1 for 107958950	bna-r.1 for 106407482	bna-r.1 for BNAA07G05990D	bna-r.1 for 111204068	cit-r.1 for 102623950	cit-r.1 for 102614540	sly-u.5 for 101245669	sot-r.1 for 102603247	sot-r.1 for 102581466	nta-r.1 for 107829471	nta-r.1 for 107827855	nta-r.1 for 107827567

Ortholog

Ortholog ID: 4085

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

Symbol

Function^*

uncharacterized LOC7468639

uncharacterized LOC7459885

uncharacterized LOC7465389

uncharacterized LOC100806760

uncharacterized LOC100798900

uncharacterized LOC100791147

uncharacterized LOC11438797

uncharacterized protein

histone acetyltransferase

uncharacterized LOC103862117

uncharacterized LOC103851128

uncharacterized LOC103832004

uncharacterized LOC100250879

uncharacterized LOC100266444

uncharacterized LOC107906875

uncharacterized LOC121225222

uncharacterized LOC107962926

uncharacterized LOC106397745

uncharacterized BNAA03G51980D

uncharacterized LOC102623950

hypothetical protein

uncharacterized LOC101245669

uncharacterized LOC102603247

uncharacterized LOC102581466

uncharacterized LOC107827855

uncharacterized LOC107827567

uncharacterized LOC107784049

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	2
mtr04981	Folate transport and metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00290	Valine, leucine and isoleucine biosynthesis	2
ghi00660	C5-Branched dibasic acid metabolism	2
ghi00966	Glucosinolate biosynthesis	2
ghi01210	2-Oxocarboxylic acid metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03008	Ribosome biogenesis in eukaryotes	5
ghi03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly04141	Protein processing in endoplasmic reticulum	3
sly03040	Spliceosome	2
sly03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	4
nta04120	Ubiquitin mediated proteolysis	4
nta00540	Lipopolysaccharide biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00230	Purine metabolism	2
nta00920	Sulfur metabolism	2
nta01320	Sulfur cycle	2

Expression

Expression pattern

Entrez Gene ID^*

7468639

7459885

7465389

100806760

100798900

100791147

11438797

822001

829364

103862117

103851128

103832004

100250879

100266444

107906875

121225222

107962926

106397745

106423297

102623950

102614540

101245669

102603247

102581466

107827855

107827567

107784049

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 7468639 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7468639 (ppo-r.4 coexpression data)


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	sbi	cre	tae	zma	osa	bdi	hvu
Paralog	6	3	1	2	3	2	3	3	2	1	2	3	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7468639 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7468639 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**