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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-r.4  7469341  U-box domain-containing protein 15 
 ppo-u.5  7469341  U-box domain-containing protein 15 
 ppo-m.4  7469341  U-box domain-containing protein 15 
 gma-u.5  100782472  U-box domain-containing protein 15 
 gma-u.5  100785760  U-box domain-containing protein 15 
 mtr-u.5  11408569  U-box domain-containing protein 15 
 ath-u.5  AT4G12710  ARM repeat superfamily protein 
 vvi-u.5  100261296  U-box domain-containing protein 3 
 ghi-r.1  107952835  U-box domain-containing protein 15 
 ghi-r.1  107954700  U-box domain-containing protein 15 
 cit-r.1  102608568  U-box domain-containing protein 3 
 sly-u.5  101265841  U-box domain-containing protein 3 
 sot-r.1  102606131  U-box domain-containing protein 15 
 nta-r.1  107814322  uncharacterized LOC107814322 
 nta-r.1  107825186  uncharacterized LOC107825186 

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Top 50 coexpressed genes to 7469341 (ppo-r.4 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469341 (ppo-r.4 coexpression data)

CoexMap"7469341"


ppoLOC7469341 | Entrez gene ID : 7469341
Species ppo gma mtr ath vvi ghi cit sly sot nta cre bra hvu bna tae bdi osa zma sbi
Paralog 3 2 1 1 1 2 1 1 1 2 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (3662 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (6111 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002320533.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  nucl_plas 2,  chlo 2,  plas 2,  nucl 1,  chlo_mito 1  (predict for XP_002320533.1)
Subcellular
localization
TargetP
other 9  (predict for XP_002320533.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

ppo-r.4
for
7469341


ppo-u.5
for
7469341


ppo-m.4
for
7469341


gma-u.5
for
100782472


gma-u.5
for
100785760


mtr-u.5
for
11408569


ath-u.5
for
AT4G12710


vvi-u.5
for
100261296


ghi-r.1
for
107952835


ghi-r.1
for
107954700


cit-r.1
for
102608568


sly-u.5
for
101265841


sot-r.1
for
102606131


nta-r.1
for
107814322


nta-r.1
for
107825186



Ortholog ID: 14033
Species ppo gma gma mtr ath vvi ghi ghi cit sly sot nta nta
Symbol LOC7469341 LOC100782472 LOC100785760 LOC11408569 AT4G12710 LOC100261296 LOC107952835 LOC107954700 LOC102608568 LOC101265841 LOC102606131 LOC107814322 LOC107825186
Function* U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 15 ARM repeat superfamily protein U-box domain-containing protein 3 U-box domain-containing protein 15 U-box domain-containing protein 15 U-box domain-containing protein 3 U-box domain-containing protein 3 U-box domain-containing protein 15 uncharacterized LOC107814322 uncharacterized LOC107825186
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00908 Zeatin biosynthesis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 7469341 100782472 100785760 11408569 826883 100261296 107952835 107954700 102608568 101265841 102606131 107814322 107825186
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