ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ppo-r.4	7469983	uncharacterized LOC7469983
ppo-u.5	7469983	uncharacterized LOC7469983
ppo-m.4	7469983	uncharacterized LOC7469983
gma-u.5	100800068	dehydrodolichyl diphosphate synthase complex subunit NUS1
gma-u.5	100796301	nogo-B receptor-like
mtr-u.5	11439929	dehydrodolichyl diphosphate synthase complex subunit NUS1
ath-u.5	LEW1	Undecaprenyl pyrophosphate synthetase family protein
bra-r.6	103836209	dehydrodolichyl diphosphate synthase complex subunit NUS1
bra-r.6	103871927	dehydrodolichyl diphosphate synthase complex subunit NUS1
vvi-u.5	100852815	uncharacterized LOC100852815
ghi-r.1	107947390	dehydrodolichyl diphosphate synthase complex subunit NUS1
ghi-r.1	121225705	dehydrodolichyl diphosphate synthase complex subunit nus1
ghi-r.1	107920824	dehydrodolichyl diphosphate synthase complex subunit nus1
bna-r.1	106346424	dehydrodolichyl diphosphate synthase complex subunit NUS1
bna-r.1	106362168	dehydrodolichyl diphosphate synthase complex subunit NUS1
bna-r.1	106431569	uncharacterized LOC106431569
cit-r.1	102614870	uncharacterized LOC102614870
sly-u.5	101250227	CPT-binding protein
sot-r.1	102596985	dehydrodolichyl diphosphate syntase complex subunit NUS1
nta-r.1	107832509	uncharacterized LOC107832509
nta-r.1	107820482	uncharacterized LOC107820482
osa-u.5	4328624	uncharacterized LOC4328624
osa-u.5	4331944	uncharacterized LOC4331944
zma-u.5	100276550	uncharacterized LOC100276550
tae-r.2	123098397	dehydrodolichyl diphosphate synthase complex subunit NUS1
tae-r.2	123093124	dehydrodolichyl diphosphate synthase complex subunit NUS1
hvu-r.1	123401081	dehydrodolichyl diphosphate synthase complex subunit NUS1
hvu-r.1	123449433	dehydrodolichyl diphosphate synthase complex subunit NUS1-like
sbi-r.1	110431824	dehydrodolichyl diphosphate synthase complex subunit NUS1-like
bdi-r.1	100835975	dehydrodolichyl diphosphate synthase complex subunit nus1
bdi-r.1	100834321	dehydrodolichyl diphosphate synthase complex subunit NUS1
cre-r.1	CHLRE_17g699650v5	uncharacterized protein

Top 50 coexpressed genes to 7469983 (ppo-r.4 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 7469983 (ppo-r.4 coexpression data)

CoexMap"7469983"

[Cytoscape]

Annotation

functional annotation

KEGG

pop00900 [list] [network] Terpenoid backbone biosynthesis (75 genes)

GO BP

GO CC

GO:1904423 [list] [network] dehydrodolichyl diphosphate synthase complex	(1 genes)	IEA
GO:0005789 [list] [network] endoplasmic reticulum membrane	(280 genes)	IEA

GO MF

GO:0045547 [list] [network] ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity

(1 genes)

IEA

Protein

XP_002305421.2 [sequence] [blastp]
XP_006384502.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cysk 1, chlo 1, nucl 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, cysk_plas 1	(predict for XP_002305421.2)
cyto 5, cysk 1, chlo 1, nucl 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, cysk_plas 1	(predict for XP_006384502.1)

Subcellular
localization
TargetP

other 8, mito 4	(predict for XP_002305421.2)
other 8, mito 4	(predict for XP_006384502.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ppo-r.4 for 7469983	ppo-u.5 for 7469983	ppo-m.4 for 7469983	gma-u.5 for 100800068	gma-u.5 for 100796301	mtr-u.5 for 11439929	ath-u.5 for LEW1	bra-r.6 for 103836209	bra-r.6 for 103871927	vvi-u.5 for 100852815	ghi-r.1 for 107947390	ghi-r.1 for 121225705	ghi-r.1 for 107920824	bna-r.1 for 106346424	bna-r.1 for 106362168	bna-r.1 for 106431569	cit-r.1 for 102614870	sly-u.5 for 101250227	sot-r.1 for 102596985	nta-r.1 for 107832509	nta-r.1 for 107820482	osa-u.5 for 4328624	osa-u.5 for 4331944	zma-u.5 for 100276550	tae-r.2 for 123098397	tae-r.2 for 123093124	hvu-r.1 for 123401081	hvu-r.1 for 123449433	sbi-r.1 for 110431824	bdi-r.1 for 100835975	bdi-r.1 for 100834321	cre-r.1 for CHLRE_17g699650v5

Ortholog

Ortholog ID: 5642

Species

ppo

gma

mtr

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LEW1

Function^*

uncharacterized LOC7469983

dehydrodolichyl diphosphate synthase complex subunit NUS1

nogo-B receptor-like

dehydrodolichyl diphosphate synthase complex subunit NUS1

Undecaprenyl pyrophosphate synthetase family protein

dehydrodolichyl diphosphate synthase complex subunit NUS1

uncharacterized LOC100852815

dehydrodolichyl diphosphate synthase complex subunit NUS1

dehydrodolichyl diphosphate synthase complex subunit nus1

dehydrodolichyl diphosphate synthase complex subunit NUS1

uncharacterized LOC106431569

dehydrodolichyl diphosphate synthase complex subunit NUS1

uncharacterized LOC102614870

CPT-binding protein

dehydrodolichyl diphosphate syntase complex subunit NUS1

uncharacterized LOC107832509

uncharacterized LOC107820482

uncharacterized LOC4328624

uncharacterized LOC4331944

uncharacterized LOC100276550

dehydrodolichyl diphosphate synthase complex subunit NUS1

uncharacterized LOC123084949

dehydrodolichyl diphosphate synthase complex subunit NUS1

dehydrodolichyl diphosphate synthase complex subunit NUS1-like

dehydrodolichyl diphosphate synthase complex subunit nus1

dehydrodolichyl diphosphate synthase complex subunit NUS1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	2
gma00561	Glycerolipid metabolism	2
gma00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	3
bra04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04120	Ubiquitin mediated proteolysis	4
ghi04141	Protein processing in endoplasmic reticulum	4
ghi04144	Endocytosis	2
ghi00020	Citrate cycle (TCA cycle)	2
ghi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00630	Glyoxylate and dicarboxylate metabolism	2
bna01200	Carbon metabolism	2
bna04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot04146	Peroxisome	2
sot03015	mRNA surveillance pathway	2
sot00260	Glycine, serine and threonine metabolism	2
sot00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	4
nta00511	Other glycan degradation	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	2
nta00511	Other glycan degradation	2
nta00600	Sphingolipid metabolism	2
nta04382	Cornified envelope formation	2
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00900	Terpenoid backbone biosynthesis	3
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	6
zma00520	Amino sugar and nucleotide sugar metabolism	5
zma01250	Biosynthesis of nucleotide sugars	5
zma00010	Glycolysis / Gluconeogenesis	4
zma00052	Galactose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00906	Carotenoid biosynthesis	3
sbi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00900	Terpenoid backbone biosynthesis	2
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

7469983

100800068

100796301

11439929

5007686

103836209

103871927

100852815

107947390

107920824

107894190

106362168

106431569

106415401

102614870

101250227

102596985

107832509

107820482

4328624

4331944

100276550

123098397

123093124

123084949

123401081

123449433

110431824

100835975

100834321

5717324

The preparation time of this page was 0.1 [sec].


Species	ppo	gma	mtr	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	1	1	2	1	3	3	1	1	1	2	2	1	2	2	1	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 7469983 (ppo-r.4 coexpression data)

Top 50 enrichment test to 7469983 (ppo-r.4 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**